Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1360 ATGAGCTCCGACGTGTCCACTGGTGGCGGCGGTTCTTCCAGCGGCTCTTCATTGGCGGTGGGCATGGACAAGAAGAGGGAGAAGGCTAAACCTCTAGCTGATGCTAAAGGGGCTAAAAAGTATAGCATGATGGAGCTCTTAAAATCACATGGAGGCTTGTCTTATATTCGAAAAATGGACCTTGAGGCAAGAAGTTTGCAGCCAAACATCAAGGCTGTGCTTCTTGCTAAGTTGCAGGAGTACAAGTCAGAATTGAATAATCTTAAAACTGAAAACCCTTCTGCTCGGGATGAGTTGTTGGAATCAGGCATGACAGATACTTTGACGCCCAGTTGTTCAGTAGATCAAGATCGTGGAGTAAAACTTCCTGATTGCAAGAGAAAGGCCTGTTGCAGCTTTGACAGATATTGGCACAGCACACTTTTCAAGAGGAAGAAATTCTTTGACATGGGTCCTATTGTAACTTCTGATGGAGGGTTCGGTTGTGATAGTGTATCTAATTCACTTGAGAAAGGAGTGGATGGTGACAACCATAGCTCATTTATAAAGTGGCATGCATCTAAGGATTCTCATGTTAATTATTTGTTTGATGTTTATTGA 600 0.4317 MSSDVSTGGGGSSSGSSLAVGMDKKREKAKPLADAKGAKKYSMMELLKSHGGLSYIRKMDLEARSLQPNIKAVLLAKLQEYKSELNNLKTENPSARDELLESGMTDTLTPSCSVDQDRGVKLPDCKRKACCSFDRYWHSTLFKRKKFFDMGPIVTSDGGFGCDSVSNSLEKGVDGDNHSSFIKWHASKDSHVNYLFDVY 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1360 199 Pfam Vesicle transport v-SNARE protein N-terminus 56 91 IPR007705 GO:0006886|GO:0016020
Acco12g1360 199 SUPERFAMILY t-snare proteins 54 92 IPR010989 GO:0016020|GO:0016192
Acco12g1360 199 MobiDBLite consensus disorder prediction 21 35 - -
Acco12g1360 199 Coils Coil 71 98 - -
Acco12g1360 199 Gene3D - 24 99 IPR038407 -
Acco12g1360 199 MobiDBLite consensus disorder prediction 1 35 - -
Acco12g1360 199 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1360 Acco-ChrAcco12 19629421 19638675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1360 26 55 MAP Kinase Kinase Kinase AT1G14000 73.333 6.60e-07 47.0