Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1302 ATGAGGCGCCAAATGTTCGGAGGCAATAATCTGGGCCACGTCATCGCCGTGGCGGCCGTTACTCTCCTCGTCCGCCTATTCTCTTCTTTTCCTGCCCCTGCCGCACTCTTGCCGGAAAATGAGAATGACAACCCCTCCAATAGGGAGGAGAAGGATGCTGATGACGATGGTAAAGCTCCGGTCTCCGGAAAAGTTTCTCCAGTCACAGTCCGTTGGAGCAATATCACGTGTTCCCTTTCCCGTAAATCCTCCGAGCCTGTGAAGTTTTTGCTCAAAAATGTGAGTGGGGAAGCGCAACCGGGTAGGCTATTAGCTATAGTGGGGCCGTCAGGTTCAGGAAAAACTATGTTGCTTGATGTTCTTGCGGGCCAGCTGGCAGCATCGCCTCAACTGCATTTGTCAGGTCTTTTGGAATTCAATGGAAAGCCAAGTTCAAACAAAACTTACAAGTTTGCTTATGTAAGGCAGGAAGATTTACATTTTTCTCAGCTCACAGTGCGGGAAACATTGTCTCTTGCTTCAGAACTACAGCTTCCTAGCATTTCTGTTGAAGAGAGAGATGAATATGTGGATAATCTTCTGTTCAAACTAGGCCTGGTCAGCTGTGCTCATATTGAAGTTCGTGGAATTAATGGCGGCGAAAAGAAGCGCCTAACTCTTGCTTGTGAGCTGATTGCATGCCCATCTGTTATATTTGCTGATGAACCCACCACCGGACTTGATGCCTTCCAAGCTGAGAAAGTCATGGAGACTCTTCAAAACCTGGCACATGATGGTCATACAGTAATTTGCTCTATACGTCAGCCAAGAGGTTCAGTGTATGGCAAATTGGATGACATAGTCTTGCTAACAGAGGGTTCACTTATTTATGCTGGTCCTGCTCATAAAGAAATATTGACTTACTTCTCAAAATTTGGGTACCACTGCCCAGATCATGTGAGTCCTGCTGAATTTTTGGCTGATCTTATATCCATTGACTATAGTTCTGCTGAGAGTGTCCATTCCTCCCAAAAAAGAGTTGATGGTCTTGTAGATTCATTCTCGCAGAGACTACCTACAATAGTTTATGCAACTCCAATAACAAGAGATGAGCTCTCCAAAAGTGGAAAGAAAATCAGAAAAAGAACTATAGCCAAGAAGAAAAGAGGTTGGTGGAAACAATTCTGGTTGCTCCTCAAGAGAGCATGGATACAGGTTTTCCGTGATGGACCAACAAACCAATTTTGGGCAAAAATATCATTTGCATCAGCAGTTACATTTGGGTCTGTTTTCTGGAAAATGGGAAGATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAGCACAGCTATGGCGGCTCTCACAAAGACTATAGGGGTGTTTCCAACGGAACGTGCAATTGTAGATAGAGAACGTACTAAGGGCTTATATGACTTGGGTCCTTATCTTCTTTCAAAATTGTTGGCCAAGATTCCCATTGCAGCAGTATTTCCATTAACGTTTAGTGCTATTTTGTACCCCATGGCGCATCTTCATCCTACTTTACTAAGATTTGGCAAATTCTGTGGTATTGTCACTATGGAATCTTTTGCTGCATCCGCAATGGGACTTACTGTAGGGGCTATGGTTCCAACCACTGATTCAGCAATGGTAGTGGGTCCCTCTCTTATGACAATTTTTGTTGTATTTGGAGGCTACTATGTCAATCATGAGAATACTCCAATCATCTTTCACTGGATTCCACGTGTTTCTCTTATCAGATGGGCCTTTCAGGGACTTTGCGCCAATGAGTTCAGGGATCTTCAATTTGATCATCACCATTCATTTGATGTTCAAACTGGAGAACAGGCACTAGAGCGCATATCATTTGGAGGAGTTAGGATCAAGGATACGGTGATAGCACAAAGCAGAATGCTGGTATTTTGGCATTGCACCACCTACTTTCTCTTAAACAGAAACAAGCCCAGGTACCAGCAACTTGAGCCACCCCTTTATTCCAACAAGTCTCATGTAAAACTTGAAGAGTTAGACCCTGAATATGTTGATCAGCCTCTTGTTTCTTCATCAGCCAGTCAAGTTGGATCCAACCTGTGCCTTCAATCTCCTCCTCAACCTGATCTTATTGGACCCTTCGCCCTAGAAGGACTGTAA 2148 0.4404 MRRQMFGGNNLGHVIAVAAVTLLVRLFSSFPAPAALLPENENDNPSNREEKDADDDGKAPVSGKVSPVTVRWSNITCSLSRKSSEPVKFLLKNVSGEAQPGRLLAIVGPSGSGKTMLLDVLAGQLAASPQLHLSGLLEFNGKPSSNKTYKFAYVRQEDLHFSQLTVRETLSLASELQLPSISVEERDEYVDNLLFKLGLVSCAHIEVRGINGGEKKRLTLACELIACPSVIFADEPTTGLDAFQAEKVMETLQNLAHDGHTVICSIRQPRGSVYGKLDDIVLLTEGSLIYAGPAHKEILTYFSKFGYHCPDHVSPAEFLADLISIDYSSAESVHSSQKRVDGLVDSFSQRLPTIVYATPITRDELSKSGKKIRKRTIAKKKRGWWKQFWLLLKRAWIQVFRDGPTNQFWAKISFASAVTFGSVFWKMGRSQTSIQDRMGLLQVAAISTAMAALTKTIGVFPTERAIVDRERTKGLYDLGPYLLSKLLAKIPIAAVFPLTFSAILYPMAHLHPTLLRFGKFCGIVTMESFAASAMGLTVGAMVPTTDSAMVVGPSLMTIFVVFGGYYVNHENTPIIFHWIPRVSLIRWAFQGLCANEFRDLQFDHHHSFDVQTGEQALERISFGGVRIKDTVIAQSRMLVFWHCTTYFLLNRNKPRYQQLEPPLYSNKSHVKLEELDPEYVDQPLVSSSASQVGSNLCLQSPPQPDLIGPFALEGL 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1302 715 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 310 IPR003439 GO:0005524
Acco12g1302 715 MobiDBLite consensus disorder prediction 43 59 - -
Acco12g1302 715 Pfam ABC transporter 91 237 IPR003439 GO:0005524
Acco12g1302 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 301 IPR027417 -
Acco12g1302 715 Gene3D - 64 303 IPR027417 -
Acco12g1302 715 Pfam ABC-2 type transporter 268 325 IPR043926 GO:0140359
Acco12g1302 715 Pfam ABC-2 type transporter 387 597 IPR013525 GO:0016020|GO:0140359
Acco12g1302 715 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 52 614 - -
Acco12g1302 715 SMART AAA_5 100 287 IPR003593 GO:0016887
Acco12g1302 715 MobiDBLite consensus disorder prediction 35 64 - -
Acco12g1302 715 FunFam ABC transporter G family member 7 68 300 - -
Acco12g1302 715 CDD ABCG_EPDR 67 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1302 Acco-ChrAcco12 17436906 17444942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1302 84 300 Calmodulin-binding Proteins AT2G36910 25.991 8.56e-08 53.9