Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1283 ATGGTCTCAAGTTTGTTTTTCGTATTCATTGTTCGCCGTCTATCTACAAGCACGAAGCTTCCGAGCATTTCAAAAATAAACTCTAGGTATAAGAACTTGGCTATCCGAGAAGCCCAGAATGCTCTCACTGAATATCTCCATGGCACAAGTTGCTTGCCCTATGTTTATGCTGAGCATATTAGCAAGAACTCTCCTCTTTTGCTGGCTAGTCTCATAGCAAAGGTAGATTTTTCAGCTGGCACTTTCTCAAAAAATCTCAAGAAATTCCTCAGTTACCACCCCATCAATGAGTTTGAATTTTTCTTTGAAAGCATTGGCATAGATTATAATGATGTTTCTGGGTTGTTGCCTTCAAACAAGTTTTTCTTTTCTGAAGATCGGACTCTTCTCGATGCGGCTGCTGCTCTTTCTGAATTTGGATTTCCATGGAATGAGTTGGGTAAGTTGTATGTGAAGAGTAGTTCCATATTTAGGAGTAGTGCGGGAGATCTCAAGTCTAGGCTATCAGAGTTTAAGAAATATGGCTTTTGTAATGTTCATTTAGTTGGTATATGTTTAGCTTTCCCTTACATTTTGAGCATGGGATGTGAAGGGGATGCTGAAAGTGAAGCATTGTTAAATTTTCTGAAGTTGGTATTTCTGGATTTTGAACTGGCATTTTTTGTTGAGGAAAATGTGAATTCCTGGCACAAGGTATGTAAGAAAGTTCGGGTATTTTATGATTTAAGTGATGATAAGGAAAGGTTAGTGGAGCTCATAAGTAGAAATAGAAGCATCTTTCTTGAACATGAGGAAGAGGTATTGATTCAGAAGGTTGAGTATTTCTGTGGATTTGATAGAAACAAAGAGGAGGTAGCTGTGTTGCTTCTTCAGAACCCGGAGTTGTTGAGTCTTAATTTAGAGAAGCCAATGATTAACATAATGACATTATTGGAATATTTTGGCTTGGAGATTGAAAACTTGAAGGATGTCAGTCAGAAGTATGATCATGTATTGGGGACAAACAAAATCGCTAATCTGCCTCAGGTAATGAGGGCTTTGAATTTACACGACTGGTTCTTCAATAAAATCAAGAATGGAAATCATGAGTTGCTAATGAAATATATAGCAAGCTACTCTGATGAAGATCGAGCTGAAGAATACCAAAGAGGGTTGGAGATGATTCAGGTTTCAAGGACCCCGAATCATACCTTGAGTAAGCTACATTTGTTGCATAGCTTTGGCTATGGGGAAAATGCTTTAATATTTGATCTCTTAGCACACTTGCATGGCACTAGTATTGAATTAAAGGAAAGATTTGATTGCCTTTTGAGTGTAGGGATTGAATACTCCAGGCTTTGTAAGATGGTAAGAATGACCCCTAAGATCCTAAACCAAAATGTTCAAGCTATAGAGCAGAAGGTGAGTTTCCTCTGCCAGGGAATGGGATGCTCTTTAGAGTATCTACATACATATCCAGGTTATCTGCTTTTTGGTTTAGAGAACCGCATTAAGCCAAGGTACAGATTTCACATGTGGCTTGTAGAAAAGGGTCTATGTACCACAGACTATTCCGTTGCAAGCTTAGTTGCAACTAGTGAGAAGGCTTTTCTAGCTCGTGTTTACAAAATGCATCCGGCTGCTCCAAAACATTGGTTTGAGCAATTCCGGTTCTAA 1656 0.3871 MVSSLFFVFIVRRLSTSTKLPSISKINSRYKNLAIREAQNALTEYLHGTSCLPYVYAEHISKNSPLLLASLIAKVDFSAGTFSKNLKKFLSYHPINEFEFFFESIGIDYNDVSGLLPSNKFFFSEDRTLLDAAAALSEFGFPWNELGKLYVKSSSIFRSSAGDLKSRLSEFKKYGFCNVHLVGICLAFPYILSMGCEGDAESEALLNFLKLVFLDFELAFFVEENVNSWHKVCKKVRVFYDLSDDKERLVELISRNRSIFLEHEEEVLIQKVEYFCGFDRNKEEVAVLLLQNPELLSLNLEKPMINIMTLLEYFGLEIENLKDVSQKYDHVLGTNKIANLPQVMRALNLHDWFFNKIKNGNHELLMKYIASYSDEDRAEEYQRGLEMIQVSRTPNHTLSKLHLLHSFGYGENALIFDLLAHLHGTSIELKERFDCLLSVGIEYSRLCKMVRMTPKILNQNVQAIEQKVSFLCQGMGCSLEYLHTYPGYLLFGLENRIKPRYRFHMWLVEKGLCTTDYSVASLVATSEKAFLARVYKMHPAAPKHWFEQFRF 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1283 551 SMART mt_12 147 177 IPR003690 GO:0003690|GO:0006355
Acco12g1283 551 SMART mt_12 447 478 IPR003690 GO:0003690|GO:0006355
Acco12g1283 551 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Acco12g1283 551 SMART mt_12 479 513 IPR003690 GO:0003690|GO:0006355
Acco12g1283 551 SMART mt_12 250 281 IPR003690 GO:0003690|GO:0006355
Acco12g1283 551 Gene3D Transcription termination factor 3, mitochondrial 71 217 IPR038538 -
Acco12g1283 551 Gene3D Transcription termination factor 3, mitochondrial 387 550 IPR038538 -
Acco12g1283 551 Gene3D Transcription termination factor 3, mitochondrial 221 355 IPR038538 -
Acco12g1283 551 PANTHER CGI-12 PROTEIN-RELATED 38 244 IPR003690 GO:0003690|GO:0006355
Acco12g1283 551 Pfam mTERF 230 335 IPR003690 GO:0003690|GO:0006355
Acco12g1283 551 Pfam mTERF 428 531 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1283 Acco-ChrAcco12 16734414 16736069 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Acco12g1283 mTERF 2.8e-16 No_clan