Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1241 ATGGGATTACAGAACCAACTCCACGATGTCTCTTCCGATTCCATTCCTCTCCTCCTCCTCCTCCACCTCGCCGCTGGCTTCAATTACCTCCGCTCCTACCTTCTCGCTTTCCTCCACTCTCTCGGCATCTCCAGATTCCACTCCCACACACCGGCGGTCGTCGACGATGCCCTCCTCGCCGCCGTCGGATCCGGATTAGCCCAACTTGTGATTCTTTCCGACCAGCTCCACGCCAACTATGATCTTACCGATGACGGCGACGACCGTGCGATTGCCGCCTCCTCCTCCATGTGTGTGGTGTGCCGGAGCGAGTATAAGGAGGGGGACCAGGTAAGGAGACTTCCCTGTCGTCATGTTTTCCATGGACGCTGCTTCGATGCTTGGCTTCACCAGCTCAAGTTTAATTGTCCTCTCTGTCGATCAGCTCTCGTCTCCGACGAGCGCGTAGCTCTCGTAGAGCGGCGCGTTGGTAGCGAAGTCTGTTCATGGTTCTCTGTTCGGTGA 504 0.5694 MGLQNQLHDVSSDSIPLLLLLHLAAGFNYLRSYLLAFLHSLGISRFHSHTPAVVDDALLAAVGSGLAQLVILSDQLHANYDLTDDGDDRAIAASSSMCVVCRSEYKEGDQVRRLPCRHVFHGRCFDAWLHQLKFNCPLCRSALVSDERVALVERRVGSEVCSWFSVR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1241 167 SMART ring_2 98 139 IPR001841 -
Acco12g1241 167 Pfam Ring finger domain 97 140 IPR001841 -
Acco12g1241 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 154 IPR013083 -
Acco12g1241 167 SUPERFAMILY RING/U-box 97 145 - -
Acco12g1241 167 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Acco12g1241 167 PANTHER RING ZINC FINGER PROTEIN-RELATED 43 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1241 Acco-ChrAcco12 15292352 15292855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1241 1 166 C3H Transcription Factor Family AT1G15100 49.398 8.78e-45 143