Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1239 ATGGAGAGAGCTTGTGAATTCTGCACATCTTTGAGGCCAGTGGTTTATTGTAAAGCAGATGAAGCATATCTTTGTCTATCCTGTGATGCAAAGGTCCATAAAGCCAATGCATTGTCCAGCCGCCACCTCAGGAATCTTGTATGTAACCTATGTAGAAACCATTTTGCTTATGTGCAGTGTTTGGATCACCGAATTTTGATCTGCCGTGGCTGTGATCAGAAGCCTCATGATCCCTCCTTAAAACACCAGAAGCGAGCTATCAGAAGTTATATGGGTTGCCCTTCTGCCAAAGACTTTGCTGTTCTCTGGGGTTTTGAATTAAATGAGATTGAAAGCAGTGATTCTGTAGATTTGAATGCAGTAAATCTCTCGGAAAGGTCCGGTAATCAAACCGGAGGCCATTCACTGGTATCATCTGGGGGTAAATCTGATGGAGGATCTAGCAGTCAACAAGGTCAGAAATTGTACAAAGATCAAGAGAGGCAAATTATTCTGCAGCAGATTATTGATTTGAAAAGGCTTCAGATCTGTAAGAAAAGTAATCAGTCTGCACTGGTAAATGTGCCGCAAGAAACAGTCTCATCTTCTCCGATGTATCATACTCGAAAGAACTATGATGAAAAATGTGATCAGCACACACAAAATCCCCAGGATTTTAATAATAATAATCTTCAGGAAAGAGACAGTCCCATGGCAGAGATGAAGCTTGAAAGCTTGTCATCCACATTTTCTGAACTTGATAATTTACCTTCATCTCCAATGATAGACCTTCCCTTAAACAGCGAGTTCTTTTGGACATGCAAAAGTTCACTTCAAAGTAATCAGTTATGGTCTCATAATATTCAAGACCTTGGAATATGTGAAGAACTAAGTTGTCAAGATGATTTTTACATACCTGATGTTGACTTAACATTCCAAAACTTTGAAGAACTATTTGGAGGAGACCAAGATCCAGTTAGAGGACTGGTTGGTGATAATGATATGTCCTGCTCTTCTATAGAGAAGGATATATCGCTTGATAAGTCAGATATCTTCAATGAAGGAACAATGGAGGATTCTTCGGAAGCCGTATCCATTCCTATCTCCCAGTCTGCTAATGAGGACAAGGATGTTGCTCCTCCAAACCAGTATGACCATAAAAACGTGGACCTTCCTCAAAAAATTCGATCATCTCATTCGACTACATCATTCTTTGTTTCAAGATTTAACCCTGAAAGCAGCTTTACTGATCATCATGACACTGGTCTTTCTCTTCACAGTGAAGGGAAAGGAAATTCTAGCTATTTCCCAGAACTTGAAGTTTCAAACATGGAGACTGGAGTAAATGACCCTATGAGGATTAAAGAAAAGAAATCTCAACAGGGCGAAAAGCAAGCTCGAGGTCAAACCAGGAAACCTGGGGCTAATGTAAGAAAGAGAATGAAAGGCCAAACAGCCAAAGCAGAAAGCTATTGA 1455 0.4014 MERACEFCTSLRPVVYCKADEAYLCLSCDAKVHKANALSSRHLRNLVCNLCRNHFAYVQCLDHRILICRGCDQKPHDPSLKHQKRAIRSYMGCPSAKDFAVLWGFELNEIESSDSVDLNAVNLSERSGNQTGGHSLVSSGGKSDGGSSSQQGQKLYKDQERQIILQQIIDLKRLQICKKSNQSALVNVPQETVSSSPMYHTRKNYDEKCDQHTQNPQDFNNNNLQERDSPMAEMKLESLSSTFSELDNLPSSPMIDLPLNSEFFWTCKSSLQSNQLWSHNIQDLGICEELSCQDDFYIPDVDLTFQNFEELFGGDQDPVRGLVGDNDMSCSSIEKDISLDKSDIFNEGTMEDSSEAVSIPISQSANEDKDVAPPNQYDHKNVDLPQKIRSSHSTTSFFVSRFNPESSFTDHHDTGLSLHSEGKGNSSYFPELEVSNMETGVNDPMRIKEKKSQQGEKQARGQTRKPGANVRKRMKGQTAKAESY 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1239 484 MobiDBLite consensus disorder prediction 363 388 - -
Acco12g1239 484 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 482 - -
Acco12g1239 484 MobiDBLite consensus disorder prediction 443 458 - -
Acco12g1239 484 SMART bboxneu5 48 87 IPR000315 GO:0008270
Acco12g1239 484 SMART bboxneu5 1 47 IPR000315 GO:0008270
Acco12g1239 484 MobiDBLite consensus disorder prediction 419 433 - -
Acco12g1239 484 CDD Bbox1_BBX-like 4 44 - -
Acco12g1239 484 MobiDBLite consensus disorder prediction 408 484 - -
Acco12g1239 484 MobiDBLite consensus disorder prediction 125 155 - -
Acco12g1239 484 MobiDBLite consensus disorder prediction 372 386 - -
Acco12g1239 484 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1239 Acco-ChrAcco12 15162374 15165751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1239 1 319 C2C2-CO-like Transcription Factor Family AT1G68190 38.199 1.28e-61 203