Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1232 ATGGAGGCTCCCTCCGCTGCTCCGCCCCTCTCCTCCGCCCCGCCCTCACATCTTAACTATCCCGACTCCGTCGACTCCTCTCCTCGCTCCCGGAACACTGATTCCTTGGATGAATCTGTTCCTTCGGCCGCCGCTTCCGCCAAGCTTCGCTTAATGTGCAGCTTCGGCGGCCACATCGTCCCTCGTCCCCACGATAAGTGCCTCTGTTACGTTGGTGGAGAAACACGTATTGTTGTCGTTGATCGCCACATCTCTCTCTCTGACCTTTCCTCTCGTCTCTCTAAAGCCTTCCTCAACGACCGTCCCTTCACTCTCAAATACTTGCTTCCCACTGAAGACCTGGATTCTCTAATTTCTGTTACCACCGATGAAGACCTCGATAATATGATCGACGAGTACGATCGAATTTCTATTACGTCAGTGAAACCCTCTAGAATCCGCCTCTTCTTGTTCTCGGTGAAACCCGATTTGACACAGTCGATTCCCGTACTTAATAGCTCGGCGAAGACAGAGGATTGGTTTCTCGGTATGCTCAATAGAGGGTTTTCGGATTCTGGTTCCGTTAATTTGTTGATGGGTTTTGATGATGAGGTTAGTGCTGGCAATCTGGAAGGGGGTGCGAAAGATGTGGAGGCTTTGGGTTCTGGATCTTTTGGAAATGGCAAGAGTGTGAAGCAGCAGGGCCAGGATGTTCACTCTGTGCCCGATTCGCCTATGTTGGAAACCACATCGTCATTTGGGTCCACTTCTTCATCGCCTTCAGTGGCGAATTTGCCGCCAATTCGGGTTCATGTTGATGATGGTAGTGGTGGTGGAGCGAGGATGCAGGATCAGAAGGCGGTGGGAATTGAGGATCAGCTTGCTCAAATGGGTATTGGTGGCGGACAGAAGCAGGATGAAGGTTTTCTGATGTCTTCACCTCCTACTATGCCGGCATCGACTGTCCCCGCCGTGACCGGTGTGCCTATTGGCTCCTCGGTCCTTACCGCCGAATATCAGAATCGTGTTGTCTCTGATGATGAGAGATCAGACCATGGAGTCCCTGGGTGCTTTAGGAAACCTCCGACACCGCAGCCACAGGCGGTGCCTCAGCCTCAGATTGTGCATACGCAATTGCAGCAGAAGCCGACTGGAGGTGTTGATTTGCCTTCTCCTGATTCAGTTTCAAGTGACAGTAGTATGTCAAATGCAATGTTGCGCCCAAAGCCTATGGTCTATCAAGACCAAGCCCAGCTCCAAATTCCCTCTGGAGCTACTACAAGGGTTCCTAGTAATCCAGTTGATCCAAAACTTGCAATGTCTGATTCTCATGGACGGATCCAAATGCAGCAACAAGTATTGGAACAGGGATATGTTTTGCAACCACAATTCGATCAACAGCAACAGCCACCTCAGCAGCAGCACCAATTTATACATGGAACACAGCAACAAGTGCAGGAAGCAGGATATGTGTTGCAGCCTCAATTCGAACAGCAGCAGCAGCAACCACCTCAGCAGCAGCACCAATTTATGCATGGAACACAGCAACAAGTACAGGAAGCAGGATATGTGTTGCAGCCTCAATTCGAAAATCAACAGCAACAATTTATACATGGCACACATTTCATTCACCATGCTCCTTCTGGGGCCGCACCACTCCCTACATTCTATCCTGTGTATCCTCCTCAGCAGCAGTTTCATCCCCAGCATCATCATCATCAGCTTGAACAGCAGTATCAGATTTACTATGTTCCCACTAGACAGACCCAACCGTACAACTTGTCTGCACAGCAACCCAATGTCAGTGAACCTGCTACAACAATTCCTTCCAGCCATGCCCAAACTTCATCGAACCCTGCGATGGTTCCGCCATCCGCGGCCTACAATGCTATGAGAAATGCTCCAGTGCCTAAATCTGAAATGAGTGGAGGTGCATATAGAACAGCAATTTCAGTCACCCCTCAAGTGCTTCAAGTTGCTTCTGATCAGACCCAGCAGCAATTTGTTGCCTATTCCCAGTATCATCCTTCTCAGGCTGCCGCTGCCAATTCTGCTGCCCCGGCTGGTTATGCTTTTGAGTATGCTGATCCTGCTCACACCCAGATATACTTCTCTCAGCCTCTGGCACCCACAATGCCTTCACAGTACCAAACTATGACGGGTGCAGCTGTACATCCAGATGTTTCTGCCCAGCCTCCCTCAGACAGCATGAAGCAGCATATAAGAACATCATAG 2214 0.5005 MEAPSAAPPLSSAPPSHLNYPDSVDSSPRSRNTDSLDESVPSAAASAKLRLMCSFGGHIVPRPHDKCLCYVGGETRIVVVDRHISLSDLSSRLSKAFLNDRPFTLKYLLPTEDLDSLISVTTDEDLDNMIDEYDRISITSVKPSRIRLFLFSVKPDLTQSIPVLNSSAKTEDWFLGMLNRGFSDSGSVNLLMGFDDEVSAGNLEGGAKDVEALGSGSFGNGKSVKQQGQDVHSVPDSPMLETTSSFGSTSSSPSVANLPPIRVHVDDGSGGGARMQDQKAVGIEDQLAQMGIGGGQKQDEGFLMSSPPTMPASTVPAVTGVPIGSSVLTAEYQNRVVSDDERSDHGVPGCFRKPPTPQPQAVPQPQIVHTQLQQKPTGGVDLPSPDSVSSDSSMSNAMLRPKPMVYQDQAQLQIPSGATTRVPSNPVDPKLAMSDSHGRIQMQQQVLEQGYVLQPQFDQQQQPPQQQHQFIHGTQQQVQEAGYVLQPQFEQQQQQPPQQQHQFMHGTQQQVQEAGYVLQPQFENQQQQFIHGTHFIHHAPSGAAPLPTFYPVYPPQQQFHPQHHHHQLEQQYQIYYVPTRQTQPYNLSAQQPNVSEPATTIPSSHAQTSSNPAMVPPSAAYNAMRNAPVPKSEMSGGAYRTAISVTPQVLQVASDQTQQQFVAYSQYHPSQAAAANSAAPAGYAFEYADPAHTQIYFSQPLAPTMPSQYQTMTGAAVHPDVSAQPPSDSMKQHIRTS 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1232 737 Pfam PB1 domain 68 152 IPR000270 GO:0005515
Acco12g1232 737 MobiDBLite consensus disorder prediction 16 39 - -
Acco12g1232 737 MobiDBLite consensus disorder prediction 590 613 - -
Acco12g1232 737 MobiDBLite consensus disorder prediction 718 737 - -
Acco12g1232 737 MobiDBLite consensus disorder prediction 1 39 - -
Acco12g1232 737 MobiDBLite consensus disorder prediction 338 395 - -
Acco12g1232 737 SUPERFAMILY CAD & PB1 domains 64 159 - -
Acco12g1232 737 CDD PB1_UP2 52 151 - -
Acco12g1232 737 MobiDBLite consensus disorder prediction 218 260 - -
Acco12g1232 737 MobiDBLite consensus disorder prediction 219 257 - -
Acco12g1232 737 MobiDBLite consensus disorder prediction 363 395 - -
Acco12g1232 737 Gene3D - 66 153 - -
Acco12g1232 737 SMART PB1_new 63 153 IPR000270 GO:0005515
Acco12g1232 737 ProSiteProfiles PB1 domain profile. 48 151 IPR000270 GO:0005515
Acco12g1232 737 PANTHER OS05G0427100 PROTEIN-RELATED 19 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1232 Acco-ChrAcco12 14977594 14979995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1232 12 215 MAP Kinase Kinase Kinase AT1G79570 34.951 1.57e-26 114