Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1228 ATGCTTCCTTTGGTCTTCTTGTTTCTTGTCCTTCTCTGTAATCATCTCTCAACTGTGATTTCTCTAAATGGTGAAGGCCATGTCCTTTTGGCTCTTAAACAGTCCATTACAGACCCAGAAGGGTCTATGAGTAACTGGAATTCTTCTAATGAAAACCCATGTTCGTGGAACGGTGTTGTATGCAAGGAACAAAGTGTTATTTCTATCAGTATCCCAAAGGGGAAGCTTTACGGCTCGCTTCCTTCTTCTCTTGGATCTCTTTCTCAGCTTCGCCATGTGAATTTCAGGAACAATAAGCTCTTTGGGAAGTTGCCTCCTGAGCTATTCCTAGCACATGGGCTTCAAAGTTTAGTCCTTTATGGCAATTCCTTTTCTGGGCCTGTTCCACAAGAGATTGGGAAGCTCAGGTACCTTCAAACCTTAGATTTATCTCAAAATTTCTTCAATGGGTCTTTGCCTGCTTCTATTGTCCAATGCAAGAGACTCAGAACCCTTGTTCTGAATAACAACAATTTCACTGGTCCGCTTCCGGATCGATTTGGTGCTGATTTGTTCTCTCTGGAAAAACTTGACCTTGCTTTCAATCACTTCAATGGCTCAATTCCTAGTGATGTGGGGAATCTATCTAGCCTACAAGGAACTGTAGATTTATCTCATAATAGTTTTTCTGGCTCAATCCCACCCAGCCTTGGTAATTTGCCTGAGAAGGTTTACATTGATCTTACTTTCAACAATTTGAGTGGTCCTATACCACAAAATGGTGCTTTGATGAACAGAGGACCAACAGCATTTATAGGCAACTCTGGTCTCTGTGGACCTCCTTTGAAAAAGCCTTGCTCTTCAGAAACTCCTGGTGCTAGTCCGCCTTCCTCATTTCCATTTCTGCCAGATAACTACCCACCTGGGGATTCTAATAATTCTTATGGGAGAAATGAGAAAACCAAAGGGTTAAGTAAGGGTGCTATTGTAGGCATTGTTGTGGGTGATATAGTTGGAATTTGTCTCTTGGGTTTGTTGTTCTCTTACTGCTACTCAAGGGTTTGTGGGTTTAATCTGGATAATGAGGATGAAGCTGGTTTTGAGAAGGGAGAGAAAGGAAGGAGGAAAGAGTGTTTTTGCTTCAGAAAGGATGAATCCGAGACCTTATCGGATAATGTTGAGCAATATGATCTTGTCCCCTTAGATTCTCAAGTGGCATTTGATTTGGATGAGCTTCTCAAGGCTTCAGCTTTTGTTTTGGGTAAGAGTGGTATAGGCATTGTCTACAAGGTGGTGCTTGAAGATGGGCTTACCTTAGCCGTGAGAAGATTAGGTGAAGGCGGTTCTCAAAGGTTTAAAGAATTCCAAACAGAAGTGGAAGCAATTGGAAGATTAAAGCATCCTAACATTGTTACCCTTAGAGCTTATTACTGGTCTGTTGATGAGAAACTTCTCATCTATGATTATATACCCAATGGAAATCTTGCTACAGCAATTCATGGGAAGGCTGGAATAGTTGCATTCACACCAATTTCTTGGTCAGTTCGGCTGCAAATCATGAAAGGAATCGCAAAAGGATTGGTCTACTTGCATGAGTTTAGCCCAAAAAAGTATGTTCATGGAGACCTGAAACCAAGTAACATACTGCTTGGGAATAACATGGAACCCCACATTTCTGATTTCGGACTTGGAAGACTTGCAAATATTGCTGGAGGGTCTCCAACCTTGCAATCCAACCGAGTCGCTGCTGAGAAACCCCATGAGCGGCAGAAGAGCTTTTCTGCATCAGAAGTCTCAGCTAATGTTTTGGGAACCGGCTACCAGGCTCCGGAAGCATTGAAAGTGGTGAAGCCATCGCAGAAATGGGACGTATATTCATATGGTGTGATTTTGATAGAGATGATCACAGGAAGGTTGCCCATTGTCCATGTGGGAAACTCGGAAATGGACCTTGTCCAATGGATTCAATTCTGCATTGAGGATAAGAAGCCACTCTCAGATGTAATAGACCCGTATCTCCCGGAAGAGGATACAGATAAGGAAGAGGAGATCATCGCGGTTTTGAAGATCGCAATGGCTTGTGTCCATAGCAGCCCCGAGAAGAGACCGACAATGAGGCATGTTCTTGATGCTTTGGATAGGTTGTCTGCTTCTTCTGATTGA 2142 0.429 MLPLVFLFLVLLCNHLSTVISLNGEGHVLLALKQSITDPEGSMSNWNSSNENPCSWNGVVCKEQSVISISIPKGKLYGSLPSSLGSLSQLRHVNFRNNKLFGKLPPELFLAHGLQSLVLYGNSFSGPVPQEIGKLRYLQTLDLSQNFFNGSLPASIVQCKRLRTLVLNNNNFTGPLPDRFGADLFSLEKLDLAFNHFNGSIPSDVGNLSSLQGTVDLSHNSFSGSIPPSLGNLPEKVYIDLTFNNLSGPIPQNGALMNRGPTAFIGNSGLCGPPLKKPCSSETPGASPPSSFPFLPDNYPPGDSNNSYGRNEKTKGLSKGAIVGIVVGDIVGICLLGLLFSYCYSRVCGFNLDNEDEAGFEKGEKGRRKECFCFRKDESETLSDNVEQYDLVPLDSQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGRLKHPNIVTLRAYYWSVDEKLLIYDYIPNGNLATAIHGKAGIVAFTPISWSVRLQIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGNNMEPHISDFGLGRLANIAGGSPTLQSNRVAAEKPHERQKSFSASEVSANVLGTGYQAPEALKVVKPSQKWDVYSYGVILIEMITGRLPIVHVGNSEMDLVQWIQFCIEDKKPLSDVIDPYLPEEDTDKEEEIIAVLKIAMACVHSSPEKRPTMRHVLDALDRLSASSD 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1228 713 Gene3D Ribonuclease Inhibitor 20 76 IPR032675 -
Acco12g1228 713 FunFam Leucine-rich repeat receptor-like protein kinase 390 482 - -
Acco12g1228 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Acco12g1228 713 PANTHER OS05G0588300 PROTEIN 132 708 - -
Acco12g1228 713 CDD STKc_IRAK 413 708 - -
Acco12g1228 713 Gene3D Ribonuclease Inhibitor 77 282 IPR032675 -
Acco12g1228 713 MobiDBLite consensus disorder prediction 276 311 - -
Acco12g1228 713 SUPERFAMILY L domain-like 24 276 - -
Acco12g1228 713 FunFam Leucine-rich repeat protein kinase family protein 483 711 - -
Acco12g1228 713 Gene3D Phosphorylase Kinase; domain 1 376 482 - -
Acco12g1228 713 FunFam Leucine-rich repeat receptor-like protein kinase 186 281 - -
Acco12g1228 713 Pfam Leucine Rich Repeat 138 157 IPR001611 GO:0005515
Acco12g1228 713 SUPERFAMILY Protein kinase-like (PK-like) 412 705 IPR011009 -
Acco12g1228 713 Pfam Protein kinase domain 413 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1228 713 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Acco12g1228 713 SMART serkin_6 412 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1228 713 ProSiteProfiles Protein kinase domain profile. 407 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1228 713 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 22 182 - -
Acco12g1228 713 Gene3D Transferase(Phosphotransferase) domain 1 483 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1228 Acco-ChrAcco12 14934391 14936698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1228 1 713 Receptor kinase-like Gene Family AT2G01210 68.923 0.0 999
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco12g1228 Pkinase 4e-35 CL0016