Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1213 ATGGTTCTACCTGTTTATTTGTTCGTCTTCTTGTCCTTGTTGGGTGACCATGTTCTTGCTCTATCTTCTGCTTCTGGAGAGTGCCCACCTTTCTTTCACTGTGGGAATCTGGGCTACCTCACGTTCCCTTACACCACTCCACAACGCAATCACTGTGGTATGTTGCCCATTCATGGCTGTGAAGATGAACACCCCAACGCTGCTAAAACTCTGCTCTTTGGAAAAAAGAGGTTGCAAGTGTTGCGAATTGGAGGCACTTTCAATACTAAAATTTCCGTTAGAGACAAAGATTTACAGCATCGTTTGGAAAAAGATGACTGTGATGCCTTGAGCCTCAATATTACTCTTCCTCCGACCTCCCCCTTGGGTTCTTTCCAAATCATTCAAGACACAATAACCTTTTACAAATGCAACATTAGCCATAAAGTTAGCCCTCCAAAGCTATTCTGGAAGTATGAAGGGTGTGATAAGAGTAATAATGTCACCATCTTCTTTCGAACGCAAGATCAAGATGATCCTCCATCTTCTTTAGCAGAATGTCAAAGGGTTCAGCTTCCAGTCAATATGCTGGCTTTCTCTTCTGATCCTTTCACATTTATAGCTTTTGAATTCACCATTAACATTCAAATTTCCCGTGACTGTGCTGCATGTTGTCTTGATAAAGGCTCCTGCCTGCTCAACAGCACCGGGGATTTTATTGTTCCAAATACACAGGGTGCTCAGTCACATGTCAGACTTCGATCAAGGAATCACTACCCAAATAATGATGCAGACCCAGACGGTGGAAGACTCTTCTTTGGAGTTCCAATATTTTCCTACATGGAGCTTCAAGACGCCACCAACAACTTTGACCCCTCCTACAAGCTCGGAGACGGCGGCTTCGGCTCTGTTTACTATGGGAAGCTTCAAGATGGGCGTGAAGTTGCAGTCAAGCATTTATCCACCAACAACTACAAGCGAGTAGAACAATTCATGACCGAAGTTGATATCCTAACTCGCCTGCGTCACACAAACCTTGTATCCCTCTTTGGCTGCACTTCGCATCAGAGCAGTGAGCTCCTCCTTGTCTATGAATACATCCCAAATGGCACTCTTGCCAGTCACCTCCGTGGCGGTTCTGCAAATCCTGTGTTGCTGACTTGGCCTATGCGCATCAAAATCGCCATAGAAACTGCCTCTGCTCTGGCTTACCTTCATGCCTCTGGCATCATCCACCGCGACGTAAAAAGCAACAACATTCTCCTTGACAAGAATTTTTGTGTTAAGGTTGCAGATTTTGGACTTTCTAGGTTGTTCCCGGATGATGTGTCGCATGTTTCTACAGCTCCACAAGGAACACCAGGCTATCTTGATCCAGAGTATCACTATTGCTTTAGGCTAACCAATAAAAGTGATGTGTATAGTTTTGGGGTTGTGCTTATGGAGCTGATATCTTCAATGCCGGCCGTAGATATGGGAAGAAACAAAGATGAGATTACATTGGCAAATCTAGCACTGAGGAAGATTCAGAGGAATGAACTTGAGGAGCTGGTGGATCCATGTTTGCGGATAGAGAATGATAGTGAGGTGAAGAAGAAGGTGGTTACTTTGGGGGAATTGGCATTCCAGTGTTTGCAGATAGATAAGGAGATGAGGCCTTCCATTGATGAGGTTTTAGAGGTTTTGAGGAAAATTGAGAGTGCGAAAGACGAAGAAGGTGAAGATTTAGAGGAAGAAGATAAAGGTACAGTGAAGACTTCAATAAGCTATGATCAGACAAAGTTGTTCAAGTCACCAATCGACATGACTAATGAGAAATGGAGGAATGGAGAAGTTGATAAAGGAAAATTATTTAGCGTTTGA 1842 0.4376 MVLPVYLFVFLSLLGDHVLALSSASGECPPFFHCGNLGYLTFPYTTPQRNHCGMLPIHGCEDEHPNAAKTLLFGKKRLQVLRIGGTFNTKISVRDKDLQHRLEKDDCDALSLNITLPPTSPLGSFQIIQDTITFYKCNISHKVSPPKLFWKYEGCDKSNNVTIFFRTQDQDDPPSSLAECQRVQLPVNMLAFSSDPFTFIAFEFTINIQISRDCAACCLDKGSCLLNSTGDFIVPNTQGAQSHVRLRSRNHYPNNDADPDGGRLFFGVPIFSYMELQDATNNFDPSYKLGDGGFGSVYYGKLQDGREVAVKHLSTNNYKRVEQFMTEVDILTRLRHTNLVSLFGCTSHQSSELLLVYEYIPNGTLASHLRGGSANPVLLTWPMRIKIAIETASALAYLHASGIIHRDVKSNNILLDKNFCVKVADFGLSRLFPDDVSHVSTAPQGTPGYLDPEYHYCFRLTNKSDVYSFGVVLMELISSMPAVDMGRNKDEITLANLALRKIQRNELEELVDPCLRIENDSEVKKKVVTLGELAFQCLQIDKEMRPSIDEVLEVLRKIESAKDEEGEDLEEEDKGTVKTSISYDQTKLFKSPIDMTNEKWRNGEVDKGKLFSV 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1213 613 FunFam Wall-associated receptor kinase-like 20 360 568 - -
Acco12g1213 613 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 596 IPR044652 GO:0004672
Acco12g1213 613 Pfam Protein tyrosine and serine/threonine kinase 288 554 IPR001245 GO:0004672|GO:0006468
Acco12g1213 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Acco12g1213 613 FunFam receptor-like protein kinase FERONIA 261 359 - -
Acco12g1213 613 CDD STKc_IRAK 289 558 - -
Acco12g1213 613 PRINTS Tyrosine kinase catalytic domain signature 357 370 IPR001245 GO:0004672|GO:0006468
Acco12g1213 613 PRINTS Tyrosine kinase catalytic domain signature 464 486 IPR001245 GO:0004672|GO:0006468
Acco12g1213 613 PRINTS Tyrosine kinase catalytic domain signature 397 415 IPR001245 GO:0004672|GO:0006468
Acco12g1213 613 Gene3D Transferase(Phosphotransferase) domain 1 360 584 - -
Acco12g1213 613 SMART serkin_6 283 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1213 613 Gene3D Phosphorylase Kinase; domain 1 263 359 - -
Acco12g1213 613 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Acco12g1213 613 ProSiteProfiles Protein kinase domain profile. 283 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1213 613 SUPERFAMILY Protein kinase-like (PK-like) 265 555 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1213 Acco-ChrAcco12 14562543 14564879 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1213 32 564 Receptor kinase-like Gene Family AT1G25390 43.210 1.10e-137 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco12g1213 PK_Tyr_Ser-Thr 6e-48 CL0016