Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1211 ATGAGGATTGCCACAGAGACAGCAAATGCATTTTCATATCTCCATGCTTACGGCATCATTTATCGTGATGTGAAATCCAGAAACGTTCTTCTTGATCAGCATTTTTGTGTCAAGGTTGCTGAGTCTGGTATTTCGAGATTACTGAAAAGAGTGATGTTTATAGCTTTGGGGTTGTCCTCACTCCTCATTGAGCTGATATCTTCTAAGCCAGCTATCTTTAATAGGGCCACTGATAAGGTTAATTTGGCAAATATGGTTGTTAAGAAGATTCAAAGAAGTGCGTTTAGTGAGATGGTAGATCATTCCCTTGGTTTTGAGTCAGATGACAAGGTTAGGGAGATGATGATCTCAGTTGCTAAGTTAGCTTTTCAGGAGATTTATACACATCTTCCAACCTCAATACGTAGGGATGGAGATGCATGA 423 0.3972 MRIATETANAFSYLHAYGIIYRDVKSRNVLLDQHFCVKVAESGISRLLKRVMFIALGLSSLLIELISSKPAIFNRATDKVNLANMVVKKIQRSAFSEMVDHSLGFESDDKVREMMISVAKLAFQEIYTHLPTSIRRDGDA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1211 140 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Acco12g1211 140 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 61 124 IPR044652 GO:0004672
Acco12g1211 140 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1211 140 SUPERFAMILY Protein kinase-like (PK-like) 2 53 IPR011009 -
Acco12g1211 140 Gene3D Transferase(Phosphotransferase) domain 1 1 53 - -
Acco12g1211 140 Pfam Protein kinase domain 3 50 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1211 Acco-ChrAcco12 14552871 14553506 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1211 1 124 Receptor kinase-like Gene Family AT1G25390 39.474 6.00e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco12g1211 Pkinase 2.3e-09 CL0016