Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1206 ATGAGGAACTCGAAGACGCAACAAACAAATTTGATCAATCAAGACAACTTGGGAGAGGAGGCTTTGGAACTGTTTACTATGCTTAAAGATGGAAGAGAAGTTGCTGTCATGCTCCTGTTTGAGCGTAACTACAGAGGTGTACAGCAATTCATAAATGAAGTTCAGATCCTCACACGATTGCGCCACAGAAACATTGTCTCACTCTATGGCTGCACTTCGTGTTCCAGCCGTGAGCTCCTGTTGGTCTATGAATACGTTTCAAATGGAACTCTTGGTTGTCATCTCCATGGCAATCTAGCAAAACAGGGTTCACTGCCATGGTCTGTGAGGATGAGGATTGCCACAGAGACAGCAAAAGCATTGTCCTATCTCCATGCTTGCGGTATCATTCACCGCGATGTGAAATCCAGCAACCTTCTTCTTGATCACCATTTTTGTGTCAAGGTTTCTGACTTTGGTATTTCGAGGTTGTTCCCCAAGCTTGTGTCTCATGTCTCCACATGTCCAGCAGGAACGCCAGGTTATTTGGACCCAGAATACTACCAATTCTGTCAGCTTACTGAAAAGAGTGATGTTTATAGCTTTGGGGTCGTCCTCATTGAACTGATATCCTCTAAGCCAGCTATCTTTACGAGGGCCACCGATAAGATTAATCTGGCAAATATGGCAGTTAAGAAGATTCAAAGAAGTGCGTTTAGTGAGCTAATAGATCCTTCCCTTGGTTTTGAGTCCGATGACAAGGTTAGGGAGATGATAATCTCAGTGGGTAAGTTGGCTTTTCGGTGCCTACAGAGGGATGTGGAGCTAAGGCCTTCCATGGGTGAAGTAATGGAGTTTCTGCAAAAAATTGAAAATGGGAATTATGATCTTAAGCATCTAGAGTTTCATGGTGCTGGATTTCCAAGCAGGGAGATTTATACATCTCTTCCAACCTCGGTACATAGGGATGAAGATGCATCATTGAACAACTCGGAGTCACAACACCCTCCCCGTACACCTGCTAGATTTGCCTTCAAGGATTTGGATGATGATTTCGAAGCTGATTTTAGGGAGTTGAAGGACGAGTCTGATATCGATGAGGTGGATGTGGATGATGATTTGCTGTGTGATTTGAAGTATCATTCGATTGTTATATCTCGATGCATTTTTTGA 1152 0.4349 MRNSKTQQTNLINQDNLGEEALELFTMLKDGREVAVMLLFERNYRGVQQFINEVQILTRLRHRNIVSLYGCTSCSSRELLLVYEYVSNGTLGCHLHGNLAKQGSLPWSVRMRIATETAKALSYLHACGIIHRDVKSSNLLLDHHFCVKVSDFGISRLFPKLVSHVSTCPAGTPGYLDPEYYQFCQLTEKSDVYSFGVVLIELISSKPAIFTRATDKINLANMAVKKIQRSAFSELIDPSLGFESDDKVREMIISVGKLAFRCLQRDVELRPSMGEVMEFLQKIENGNYDLKHLEFHGAGFPSREIYTSLPTSVHRDEDASLNNSESQHPPRTPARFAFKDLDDDFEADFRELKDESDIDEVDVDDDLLCDLKYHSIVISRCIF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1206 383 Pfam Protein kinase domain 29 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1206 383 SMART serkin_6 11 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1206 383 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 27 317 IPR044652 GO:0004672
Acco12g1206 383 FunFam Wall-associated receptor kinase-like 20 86 292 - -
Acco12g1206 383 Gene3D Phosphorylase Kinase; domain 1 25 86 - -
Acco12g1206 383 ProSiteProfiles Protein kinase domain profile. 11 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1206 383 SUPERFAMILY Protein kinase-like (PK-like) 26 287 IPR011009 -
Acco12g1206 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Acco12g1206 383 Gene3D Transferase(Phosphotransferase) domain 1 87 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1206 Acco-ChrAcco12 14400400 14403260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1206 25 285 Receptor kinase-like Gene Family AT1G25390 58.935 5.83e-105 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco12g1206 Pkinase 1e-40 CL0016