Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1205 ATGCATTTCTCTTCTAATCCATTCGCATTCATTGCTTCTGACTTCCCTGTTAACATCCATCTTTCTGATGACTGTTTACGCCAAGATCTCCTTCTGGTCTATGAATACATCCCAAATGGCACAGTTGCTAGTCACCTCCAAGGTAACAATAACTCCTTATCAACATCTACGCCACTACCATGGCCTATTCCTCTTAAAATCGGAATAGAAATTGCAAGTGCATTGGTCTACCTCCATGCTTCAGACATCATCCATCGCGATGTAAAGACTAACAACATCCTCGTAGATGCTGACTTTGGACTCTCTAGATTGTTCCCCAATGATGTGTCACATCTGATATCTTCGAAGCCTGCGGTGGATATAAGTAGGAGTAAGGATGAAGTGAACTTGTTGAGCTCAGCGATGAAGAAGATTCAGGAGGGTGCGTTTATGGAACTGGTGGATCCGTGTCTGGGGATTGAGAAGGATGGTGAAGTGAAGAGGATGGTGGTTTCTGTTGGGGAATTGGCTTTTCAATGTTTGCAAGGAGACAAGGATTTGAGGCCTTCTATGGAAGAGGTTTTGGAAGCTCTCAAGAAGATTCAGAGTGGTACAGGTGATGAAGAGGTTGCGAATCTGTGA 621 0.4396 MHFSSNPFAFIASDFPVNIHLSDDCLRQDLLLVYEYIPNGTVASHLQGNNNSLSTSTPLPWPIPLKIGIEIASALVYLHASDIIHRDVKTNNILVDADFGLSRLFPNDVSHLISSKPAVDISRSKDEVNLLSSAMKKIQEGAFMELVDPCLGIEKDGEVKRMVVSVGELAFQCLQGDKDLRPSMEEVLEALKKIQSGTGDEEVANL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1205 206 ProSitePatterns Serine/Threonine protein kinases active-site signature. 83 95 IPR008271 GO:0004672|GO:0006468
Acco12g1205 206 SMART tyrkin_6 19 191 IPR020635 GO:0004713|GO:0006468
Acco12g1205 206 Gene3D Transferase(Phosphotransferase) domain 1 114 204 - -
Acco12g1205 206 Pfam Protein tyrosine and serine/threonine kinase 26 108 IPR001245 GO:0004672|GO:0006468
Acco12g1205 206 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1205 206 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 28 111 IPR044652 GO:0004672
Acco12g1205 206 Gene3D Transferase(Phosphotransferase) domain 1 15 113 - -
Acco12g1205 206 SUPERFAMILY Protein kinase-like (PK-like) 20 195 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1205 Acco-ChrAcco12 14390174 14391530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1205 28 196 Receptor kinase-like Gene Family AT1G25390 49.309 1.01e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco12g1205 Pkinase 4.3e-12 CL0016