Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1201 ATGCAATATCCTCCATCTCCTCCTTGTCTTCAATGTCTTAATTCCGGAGAATGCGATGACGAATGCAGCGCCCCTGATATTAATTCCGGAGAAGAACAATGCCATGATCACAAGAAAATCGATTCCAAGTCTATAATAATAGTTGCGTGTCCAGGGCCTTTTTACTGTAATGAGCCAAAGGAACCTTTAGAGGTCAAATTGGGAGATGAATGGTTCCTTGTTGAGAAAATCATCCACCAAAATGATAACGGACTTATAATCATAGTTCGTTATTTAGGATTAGTAGCTGAGATCTGTATGCAATATCCTCCATCTCATTCTTGTCGTGACTGTCTTGAATCCGGAGGACAATGCGATGGCGAATGCAGCGTCAGTGAGCCCAAGAATATAGATTCCAATTCTATAATAACAGTTCCGTGTCCATGGCCTTTTAAATGTAAAGAGCCAAAGCCGCCAGAGCAACCTGTAATGTTCCAATTGGGAAACGGATGGTTCATTGTTGAGAAAATCTACCAAAATGATAACCAACATATAATCACCGTTCGTGATTCAAATTTAACAGCTGAGATCTATATGCAATATCCATCTCATTCTTGTCTTGAATGTCTTAATTACGGAGAAGGACAATGCGAAGGCAAATGCAGCGCCCGTGGTGTAGTAGCCATTGGAAGTGTTGGCGTGATTATAATAGGCTTGATTGTTATCCTATTGCGGAACAAACGAAGATACAAGGCGTTAGGTTCACAAAATCAGTCAAGAAGCATTGAATCTGATAACACTCACTCAAGAACCAATCAATCTGATAATACTCACTCAAATGCAATCCTAGAAAGTAGAAATATCTACTTTGGGGTCCCTGTCTTCTCCTATGATGAACTCGAAGAAGCAACAAACAAATTTGATCAATCAAAAGAACTTGGAAGTGGAGGCTTTGGAATTGTTTACCATGGAAAGCTTAAAGACGGACGGGAAGTTGCTGTGAAGCGCCTATTTGAGCGCAACTATAAACGTGTACAACAGTTCATAAATGAAGTTAAGATCCTCACACGCTTGCGCCACAGAAATCTTGTCTCACTCTATGGGTGCACTTCACGTGCAAGTCAAGAACTGCTGCTGGTCTACGAGTACATTCCAAATGGAACTCTTGGTAGTCATCTCCATGGAAATCTAGCAAAACCTGGTTCACTTCCATGGTCAGTGAGGATGAGGATTGCCATAGAGACAGCAAATGCATTGTCCTATATCCATGCTTGCGGCATCATTCACCGCGATGTGAAATCTAGCAACCTTCTTCTTGATCACCATTTTTGTGTCAAAGTTGCTGACTTTGGTATTTCAAGGTTGTTCTCCAAGCTTGTGTCTCATGTCTCCACATGTCCAGCAGGAAGCCCGGGTTATTTGGACCCAGAATATTACCAATTCTGTCAGCTTACTGAAAAGAGTGATGTTTATAGCTTTGGAGTCGTCCTCATTGAGTTGATATCTTCTAAGCCAGCTATCTTTACGAGGGCCACTGATAAGATTAATTTGGCAAATATGGCAGTTAAGAAGATTCAAAGAAGTGCGTTTAGTGAGCTGGTAGATCCTTCCCTTGGTTTTGAGTCAGATGACAAGGTAAGGGAGATGATAATCTCAGTGGCAAAGTTAGCTTTTCGGTGCCTACAGAGGGATGTGGAGCTAAGACCTTCCATGGGCGAAGTAATGGAGTTTCTACAGAAAATTGAAAATGGGAATTATGATCTTAAGCATCTAGAGTTTCATGGTGCTGGGTTTCCAAACAGGGAGAATTATACATCTCTTCCAACCTCCGTACATAGGGATGGAGATTCATCATTGAACAACTTGGAGCCACAGCACCCTTCCCGTACAGTATAA 1875 0.4165 MQYPPSPPCLQCLNSGECDDECSAPDINSGEEQCHDHKKIDSKSIIIVACPGPFYCNEPKEPLEVKLGDEWFLVEKIIHQNDNGLIIIVRYLGLVAEICMQYPPSHSCRDCLESGGQCDGECSVSEPKNIDSNSIITVPCPWPFKCKEPKPPEQPVMFQLGNGWFIVEKIYQNDNQHIITVRDSNLTAEIYMQYPSHSCLECLNYGEGQCEGKCSARGVVAIGSVGVIIIGLIVILLRNKRRYKALGSQNQSRSIESDNTHSRTNQSDNTHSNAILESRNIYFGVPVFSYDELEEATNKFDQSKELGSGGFGIVYHGKLKDGREVAVKRLFERNYKRVQQFINEVKILTRLRHRNLVSLYGCTSRASQELLLVYEYIPNGTLGSHLHGNLAKPGSLPWSVRMRIAIETANALSYIHACGIIHRDVKSSNLLLDHHFCVKVADFGISRLFSKLVSHVSTCPAGSPGYLDPEYYQFCQLTEKSDVYSFGVVLIELISSKPAIFTRATDKINLANMAVKKIQRSAFSELVDPSLGFESDDKVREMIISVAKLAFRCLQRDVELRPSMGEVMEFLQKIENGNYDLKHLEFHGAGFPNRENYTSLPTSVHRDGDSSLNNLEPQHPSRTV 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1201 624 FunFam Wall-associated receptor kinase-like 20 377 583 - -
Acco12g1201 624 ProSiteProfiles Protein kinase domain profile. 300 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1201 624 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 97 606 IPR044652 GO:0004672
Acco12g1201 624 SUPERFAMILY Protein kinase-like (PK-like) 281 576 IPR011009 -
Acco12g1201 624 MobiDBLite consensus disorder prediction 597 624 - -
Acco12g1201 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Acco12g1201 624 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Acco12g1201 624 FunFam receptor-like serine/threonine-protein kinase NCRK 276 376 - -
Acco12g1201 624 Gene3D Transferase(Phosphotransferase) domain 1 377 583 - -
Acco12g1201 624 SMART serkin_6 300 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1201 624 MobiDBLite consensus disorder prediction 248 270 - -
Acco12g1201 624 CDD STKc_IRAK 306 574 - -
Acco12g1201 624 Gene3D Phosphorylase Kinase; domain 1 273 376 - -
Acco12g1201 624 Pfam Protein kinase domain 301 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1201 Acco-ChrAcco12 14350598 14354089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1201 181 576 Receptor kinase-like Gene Family AT1G25390 48.916 1.07e-127 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco12g1201 Pkinase 9.8e-48 CL0016