Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1200 ATGAGAATCCACAAATTTTGGCCGGCAGAAAGTATGAAACTTAGCATGGCTACTCCCGATTCTCTGCTTCCTTTGCTTTGTCTGTGTTGTTTTCTGCTTCCTGTCTCAGTTGCGTGTCCAGGGCCTTTTTACTGTAATGAGCCAAAGGAACCTTTAGAGGTCAAATTGGGAGATGAATGGTTCCTTGTTGAGAAAATCATCCACCAAAATGATAACGGACTTATAATCATAGTTCGTTATTTAGGATTAGTAGCTGAGATCTGTATGCAATATCCTCCATCTCATTCTTGTCGTGACTGTCTTGAATCCGGAGGACAATGCGATGGCGAATGCAGCGTCAGTGAGCCCAAGAATATAGATTCCAATTCTATAATAACAGTTCCGTGTCCATGGCCTTTTAAATGTAAAGAGCCAAAGCCGCCAGAGCAACCTGTAATGTTCCAATTGGGAAACGGATGGTTCATTGTTGAGAAAATCTACCAAAATGATAACCAACATATAATCACCGTTCGTGATTCAAATTTAACAGCTGAGATCTATATGCAATATCCATCTCATTCTTGTCTTGAATGTCTTAATTACGGAGAAGGACAATGCGAAGGCAAATGCAGCGCCCGTGAGCACCAGAAAATCGATTCCAAGTCTATAATAATAGGTGTAGCCATTGGAAGTGTTGGCGTGATTATAATAGGCTTGATTGTTATCCTATTGCGGAACAAACGAAGATACAAGGCGTTAGGTTCACAAAATCAGTCAAGAAGCATTGAATCTGATAACACTCACTCAAGAACCAATCAATCTGATAATACTCACTCAAATGCAATCCTAGAAAGTAGAAATATCTACTTTGGGGTCCCTGTCTTCTCCTATGATGAACTCGAAGAAGCAACAAACAAATTTGATCAATCAAAAGAACTTGGAAGTGGAGGCTTTGGAATTGTTTACCATGGAAAGCTTAAAGACGGACGGGAAGTTGCTGTGAAGCGCCTATTTGAGCGCAACTATAAACGTGTACAACAGTTCATAAATGAAGTTAAGATCCTCACACGCTTGCGCCACAGAAATCTTGTCTCACTCTATGGGTGCACTTCACGTGCAAGTCATGAACTGCTGCTGGTCTACGAATACATTCCAAATGGAACTCTTGGTTGTCATCTCCATGGAAATCTAGCAAAACCTGGTTCACTTCCATGGCTAGTGAGGATGAGGATTGCCATAGAGATAGCAAATGCATTGTCCTATCTTCATGCCTGTGACATCATTCACCGTGATGTCAAATCCACCAACCTTCTTCTTGATTATCATTTTTGCATCAAGGTTGCTGACTTTGGTCTTTCGAGGTTGTTCCCCAAGTTTGCCACTCATGTCTCCACAGCTCCAGCGGGAAGCCCAGGTTATTTGGACCCCGAATATCACCAATGCTACCAGCTTACTGAAAAGAGTGATGTCTATAGCTTTGGAGTCGTGCTAATTGAGCTGATATCTTCTAAGCCAGCTATCGATGTTACAAGGCACAAGGATGAGATTAAATTGGCAAATATGGCAGTTAACAAGATCCAAAGAGGAGCGTTGGCTGAGCTGGTAGATCCTTCGCTTGGTTTTGAGTCAGATGATGAGGTTAAGAAGATGATAATCTCAGTGGCAAAGTTAGCTTTTCAGTGCCTACAGAGGGATAGGGAGCTCAGACCTTCCATGGATGAAGTAATGGAGTTTCTGCAGAAAATTGAAAATGGGAATCATGATCTTAGGCATCTAGAGATTCATAGTGCTGGGTTTTCAAACAGGGAGATTCATAAATCTCTCCCAACCACAGAGCATAGGGATGGAGCTGCATCATTGAACAACTCAAAGCCACAACGCCCACCCCATACAATATGA 1878 0.4207 MRIHKFWPAESMKLSMATPDSLLPLLCLCCFLLPVSVACPGPFYCNEPKEPLEVKLGDEWFLVEKIIHQNDNGLIIIVRYLGLVAEICMQYPPSHSCRDCLESGGQCDGECSVSEPKNIDSNSIITVPCPWPFKCKEPKPPEQPVMFQLGNGWFIVEKIYQNDNQHIITVRDSNLTAEIYMQYPSHSCLECLNYGEGQCEGKCSAREHQKIDSKSIIIGVAIGSVGVIIIGLIVILLRNKRRYKALGSQNQSRSIESDNTHSRTNQSDNTHSNAILESRNIYFGVPVFSYDELEEATNKFDQSKELGSGGFGIVYHGKLKDGREVAVKRLFERNYKRVQQFINEVKILTRLRHRNLVSLYGCTSRASHELLLVYEYIPNGTLGCHLHGNLAKPGSLPWLVRMRIAIEIANALSYLHACDIIHRDVKSTNLLLDYHFCIKVADFGLSRLFPKFATHVSTAPAGSPGYLDPEYHQCYQLTEKSDVYSFGVVLIELISSKPAIDVTRHKDEIKLANMAVNKIQRGALAELVDPSLGFESDDEVKKMIISVAKLAFQCLQRDRELRPSMDEVMEFLQKIENGNHDLRHLEIHSAGFSNREIHKSLPTTEHRDGAASLNNSKPQRPPHTI 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1200 625 ProSiteProfiles Protein kinase domain profile. 300 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1200 625 MobiDBLite consensus disorder prediction 604 625 - -
Acco12g1200 625 Pfam Protein kinase domain 301 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1200 625 SUPERFAMILY Protein kinase-like (PK-like) 281 577 IPR011009 -
Acco12g1200 625 Gene3D Phosphorylase Kinase; domain 1 273 376 - -
Acco12g1200 625 FunFam receptor-like serine/threonine-protein kinase NCRK 276 376 - -
Acco12g1200 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Acco12g1200 625 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Acco12g1200 625 Gene3D Transferase(Phosphotransferase) domain 1 377 586 - -
Acco12g1200 625 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 89 603 IPR044652 GO:0004672
Acco12g1200 625 MobiDBLite consensus disorder prediction 607 625 - -
Acco12g1200 625 MobiDBLite consensus disorder prediction 248 271 - -
Acco12g1200 625 FunFam Wall-associated receptor kinase-like 20 377 584 - -
Acco12g1200 625 SMART serkin_6 300 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1200 625 CDD STKc_IRAK 306 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1200 Acco-ChrAcco12 14313225 14315768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1200 170 577 Receptor kinase-like Gene Family AT1G25390 51.325 3.69e-140 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco12g1200 Pkinase 5.7e-47 CL0016