Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1192 ATGGCCTCTGGTGAAGGGAGGCGACGTCATCATGATCTTGTGCCCCTCGCTGCATTATTAAGCAGAGAGATGAAGACTGAGAAGATGGAGAAGCCCACCGTGAGTTATGGACATGCCGCTCAGTCTAGGAAAGGCGAGGATTACTTTCTAATTAAGACTGATTGTCAGCGAGTACCTGGGAATCCTTCAACAGCATTTTCTGTATTTGCGATCTTTGATGGACACAATGGAAATGCTGCGGCCATTTTCAGTAGGGAGCATTTGTTAAATCATGTGTTGAGTGCTGTTCCTCGTGGTCTTGGACGGGACGAGTGGCTTCAAGCTTTACCTCGGGCCTTGGTTGCGGGGTTTGTGAAGACTGACAAAGAATTCCAGAGCAGAGGAGAAACTTCTGGAACTACAGCCACATTTGTGATAGTTGATAGATGGACAGTCACTGTTGCATCTGTTGGTGATTCTCGTTGCATATTAGACACCCAAGGCGGAGCTGTTACAAACTTAACTGTCGATCACCGGCTCGAAGAGAATATCGAAGAGAGGGAACGTGTTACAGCTAGTGGAGGTGAAGTTGGGAGGCTGAGCATTGTTGGCGGTGCAGAGATTGGTCCCCTTCGTTGTTGGCCAGGCGGATTGTGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAATACCATATGTCAAACAAGTGAAGCTATCGAATGCTGGTGGGAGGCTTATAATTGCTTCTGATGGCATCTGGGATGCTTTATCCTCAGACATGGCTGCAAAATCTTGCAGGGGTTTGCCAGCTGAACTTGCCGCAAGGCAGGTTGTCAAGGAAGCATTAAGAACAAGAGGGTTAAAGGATGACACAACTTGCATAGTCGTTGACATAATTCCTCCTGAAAATACAATGCCACCGCCACCTCTCCCTAAAAAGAAGAACAGGTTGAGGGCTCTGCTTTTCAGGAAGAAGTCTCGTGATGCTGCTGGTAAGCTATCAAAGAAGCTTTCAGCTATAAATATTGTGGAGGAACTGTTCGAAGAAGGATCAGCTATGCTTGCTGAAAGATTGGGGAGTGATGAGAATACAGGGCAATCGACATCAGGTCTCTTTATATGTGCCGTGTGCCAAGTTGACCTTGCCCCAAGTGAAGGCATCTCTGTTCATGCTGGTTCAATCTTCTCCACCAGCTCAAAGCCCTGGCAAGGCCCTTTTCTATGTGCCGGTTGTCGCGATAAGAAGGATGCCATGGAAGGGAAACGTCCTAGTGGAATCAAAGTGTCATAG 1287 0.474 MASGEGRRRHHDLVPLAALLSREMKTEKMEKPTVSYGHAAQSRKGEDYFLIKTDCQRVPGNPSTAFSVFAIFDGHNGNAAAIFSREHLLNHVLSAVPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTNLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDIIPPENTMPPPPLPKKKNRLRALLFRKKSRDAAGKLSKKLSAINIVEELFEEGSAMLAERLGSDENTGQSTSGLFICAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCAGCRDKKDAMEGKRPSGIKVS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1192 428 SMART PP2C_4 27 295 IPR001932 -
Acco12g1192 428 SUPERFAMILY PP2C-like 34 297 IPR036457 -
Acco12g1192 428 Pfam Protein phosphatase 2C 61 282 IPR001932 -
Acco12g1192 428 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722|GO:0006470
Acco12g1192 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Acco12g1192 428 CDD PP2Cc 34 297 IPR001932 -
Acco12g1192 428 Gene3D - 31 302 IPR036457 -
Acco12g1192 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Acco12g1192 428 SMART PP2C_SIG_2 51 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1192 Acco-ChrAcco12 14130426 14133713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1192 1 427 PP2C-type Phosphatase Gene Family AT1G68410 80.275 0.0 706