Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1190 ATGGCGGCATCCTCTCGCCTCTCTCTACTGGTTTTCTTCTTCTTCTTAGTTTCTCATTTGCTTCTTCCGGCTGAAGCGTTCATAAACCAAGATTTAGAAGCTCTAATGGCGTTCAAAGCCACTTCTGATGCTAACAACAAGCTCGCGTCTTGGAACTCAAGTACCAACCCCTGTAACTGGGGTTTTGTCTCATGCCTCAAGAATCGAGTTTCACGACTTGTTCTTGAGAATCTCGATCTCCATGGCTCTATCGAGCCGTTAACTTCTCTCACTCAGCTTCGAGTTCTGAGCCTGAAGCAAAACCATTTTTCCGGTCCCATTCCGAGTCTGTCTAATTTTACAGCTCTGAAGCTTCTGTTTCTTTCTCACAATGAGTTCTCCGGTGAGTTTCCGGTGACGGTTACGTCGCTTCTCCGTTTGTATGGCCTTGATCTGTCTCACAACAATTTCTCTGGCGACATTCCGACTGCGGTCAACAACCTCACTCACCTTCTCTCCCTCCGTCTCAATGACAACCAGTTCTCCGGTCGCATTCCCCATTTAAACCTCTCCAAGTTACAAGACTTCAATGTCTCCGGCAACCACCTCTCTGGTGAAATACCCAAATCGGTCTCGGGTTTCCGCAAATCATCATTCGACCAAAACCCATCTCTATGCGGAGCTCCATTGGTGAAATGTAAGGACACTCATGCCGTACCGTTTAAACCCGACGGATCTGTGGGACCCAATATTGCATCGCCATTGACGCCGAGAAGCAATCCTTCAACGCCGGCGAACAACAAAACAGCCCCCAAAACCCCATCTAACACCACCCACCACCACCGCCATCAAAATGGAGCTTCAAAGATGAGCCCAGTAATTCTAATCGCCATTATCGTCGGCGACGTTTTGATTCTTACCATAGTGTCCCTTCTTTTATACTGCTGCTTCTGGCAAAACTACTCTGCAAAATTGAAAGAAGGAAACCGGTCGAAGCTTCTAGAAGGCGAGAAGATCTTGTATTCATCAAGCCCATACCCACCATCATCATCAACTCAGATCGGATTAGAGAGGGGTCAAATGGTGTTCTTTGAAGGGATGAAGAAGTTTGAGCTAGAGGATTTGCTTCGAGCTTCTGCAGAAATGTTAGGGAAAGGTGGATTTGGGACGGCGTATAAAGCTGTTCTTGATGACGGCAATGTCGTCGTCGTGAAGAGGCTTAAGGATGCTCAGATTAATGGGAAGAAAGAGTTCGAGCAACACATGGAAATTCTTGGAAGATTGAGGCATCCTAATATTGTGAGCTTGAGAGCTTACTATTATGCTCGAGATGAGAGATTGCTGGTTTGTGATTACATGACCAATGGAAGCTTGTTTTGGCTACTTCATGGGAACCGAGGGCCCGGAAGAAGCCCACTGGATTGGACCACTCGGCTCAAGATAGCCGCCGGAGTGGGCCGAGGGTTAGCCTTTATCCACGGCTCATGCAAGGCCCTTAAGCTCACCCACGGTAACATCAAATCCACCAACATCCTTATCGACCAGGACGGGGAGCCACACGTGGCAGACTTTGGGCTCTCCGATTTTGCAGTCCCAGCCACCAAATCGAACGGCTATCGTGCCCCAGAAGCAATGGACGGTCGGAAGAATACGCAGAAATCTGACGTGTACTCATTCGGTGTTCTTCTGCTGGAGCTTCTCACAGGGAAGTGCCCCTCTGTGGGTGAGTCGGCTGGGCCCGGGGGAGGTGGAGCCGTGGACCTACCCAGGTGGGTCCAGTCAGTGGTGAGAGAGGAATGGACGGCTGAGGTGTTCGACATTGAGCTGATGAGGTACAAGGACATTGAAGAGGAAATGGTGGGGCTGCTTCAGATCGCGATGACTTGTTGCGCGGCAATGCCGGATCAACGGCCCAGGATGAGCCACGTGGTGAAGATGATTGAGGATATACGTGGGGTTGAGATTTCGCCCAGTCGTGACACGTCGGACTCGGTGTCCGAGTCGCCATCGTTGTCGGGTTAG 2001 0.5002 MAASSRLSLLVFFFFLVSHLLLPAEAFINQDLEALMAFKATSDANNKLASWNSSTNPCNWGFVSCLKNRVSRLVLENLDLHGSIEPLTSLTQLRVLSLKQNHFSGPIPSLSNFTALKLLFLSHNEFSGEFPVTVTSLLRLYGLDLSHNNFSGDIPTAVNNLTHLLSLRLNDNQFSGRIPHLNLSKLQDFNVSGNHLSGEIPKSVSGFRKSSFDQNPSLCGAPLVKCKDTHAVPFKPDGSVGPNIASPLTPRSNPSTPANNKTAPKTPSNTTHHHRHQNGASKMSPVILIAIIVGDVLILTIVSLLLYCCFWQNYSAKLKEGNRSKLLEGEKILYSSSPYPPSSSTQIGLERGQMVFFEGMKKFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVVVKRLKDAQINGKKEFEQHMEILGRLRHPNIVSLRAYYYARDERLLVCDYMTNGSLFWLLHGNRGPGRSPLDWTTRLKIAAGVGRGLAFIHGSCKALKLTHGNIKSTNILIDQDGEPHVADFGLSDFAVPATKSNGYRAPEAMDGRKNTQKSDVYSFGVLLLELLTGKCPSVGESAGPGGGGAVDLPRWVQSVVREEWTAEVFDIELMRYKDIEEEMVGLLQIAMTCCAAMPDQRPRMSHVVKMIEDIRGVEISPSRDTSDSVSESPSLSG 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1190 666 FunFam pollen receptor-like kinase 1 341 445 - -
Acco12g1190 666 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 446 653 - -
Acco12g1190 666 Gene3D Phosphorylase Kinase; domain 1 344 445 - -
Acco12g1190 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 644 IPR046959 -
Acco12g1190 666 ProSiteProfiles Protein kinase domain profile. 370 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1190 666 Gene3D Ribonuclease Inhibitor 87 232 IPR032675 -
Acco12g1190 666 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Acco12g1190 666 SUPERFAMILY L domain-like 37 224 - -
Acco12g1190 666 SUPERFAMILY Protein kinase-like (PK-like) 374 640 IPR011009 -
Acco12g1190 666 Gene3D Ribonuclease Inhibitor 23 86 IPR032675 -
Acco12g1190 666 Pfam Protein kinase domain 373 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1190 666 MobiDBLite consensus disorder prediction 245 267 - -
Acco12g1190 666 MobiDBLite consensus disorder prediction 237 279 - -
Acco12g1190 666 Gene3D Transferase(Phosphotransferase) domain 1 446 659 - -
Acco12g1190 666 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
Acco12g1190 666 FunFam Leucine-rich repeat receptor-like protein kinase 28 180 - -
Acco12g1190 666 CDD STKc_IRAK 376 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1190 Acco-ChrAcco12 14109203 14112695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1190 31 665 Receptor kinase-like Gene Family AT1G68400 65.789 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco12g1190 Pkinase 2.3e-38 CL0016