Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1186 ATGGGTACAGGTTCCAAGATCGATGGACCTTCGACCCCATCAATTCGACGAGACCCTTATGAGGTATTGTCCGTGCCAAGGGACGCAAATGACCAGGACATAAAAACGGCTTACAGAAAGCTCGCTCTCAAGTATCACCCTGACAAGAACGCTAACAATCCTGAAGCATCCGAATTATTTAAAGAGGTTGCATATTCTTACAACATCTTATCTGATCCAGAGAAGAGAAGGCAGTATGATAGTGCAGGATTTGAGGCATTTGATGCCGATAACTTGGACATGGAAATTGATTTGTCAAATCTTGGAACTGTTAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATCAAGACTACTATCTCAGCAAATGTTCTTGAAGAAGCCCTGAATGGCACAGTTACAGTCAAACCTCTTCCTATTGGGACGTCAGTTAGTGGAAAGGTAGAGAAGCAATCTGCTCATTTTTATGGTGTGACGATAAATGAGCAGCAAGCTGAGGCAGGGATTGTAGTAAGAGTTACTTCAACAGCACAAAGCAAATTCAAACTGCTCTACTTTGAACATGATGCAAATGGTGGGTATGGTGTGGCGTTACAGGAAGATAGCGAAAAGACGGGTAAAGTGACATCCGCTGGCATGTATTTCTTACATTTTCAAGTATACAGAATGGATTCAACTGTGAATGCGTTAGCAATGGCAAAGGATCCTGACGCTGCGTTCTTCAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGAATTAAAGCCTGACACTCATATATTTGCTGTTTATGGAGATAACTTCTTTAAGACTGCTTCCTATACAATTGAGGCTCTTTGTGCAAAATCTTATGAGGGTACCTCTGAGAAACTTAAGGACATTGAAGCTCAAATTCTTAAGAAAAGGAATGATTTGCACCAATTTGAATCAGAATACAGAAAGGCATTGGCACGCTATCAAGAGGTGACTGAAAGATATGCTCAAGAAAAACAAGCAGTTGAAGAACTTCTGAAAGAGAGAGACGCTATTCATAATTCCTTCACCGTTGCAAGGTCTGTCTCTGTCAGCACGAACAGCAGTAATTTAAGTAACGAAAGTAGTAGCAAAATTGCTGGCGAGGATTCCAATTCCATGGCAGAGAGCCCTGTGGAAGATGGAAGCTCAGATGGCAAGGACAAATCAAGCAAAAAGAAATGGTTCAACCTCAATCTTAAGGGATCTGATAAGAGAAATTGA 1248 0.4151 MGTGSKIDGPSTPSIRRDPYEVLSVPRDANDQDIKTAYRKLALKYHPDKNANNPEASELFKEVAYSYNILSDPEKRRQYDSAGFEAFDADNLDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVKPLPIGTSVSGKVEKQSAHFYGVTINEQQAEAGIVVRVTSTAQSKFKLLYFEHDANGGYGVALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPDAAFFKRLEGLQPCEVSELKPDTHIFAVYGDNFFKTASYTIEALCAKSYEGTSEKLKDIEAQILKKRNDLHQFESEYRKALARYQEVTERYAQEKQAVEELLKERDAIHNSFTVARSVSVSTNSSNLSNESSSKIAGEDSNSMAESPVEDGSSDGKDKSSKKKWFNLNLKGSDKRN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1186 415 CDD DnaJ 18 72 IPR001623 -
Acco12g1186 415 Pfam DnaJ domain 18 80 IPR001623 -
Acco12g1186 415 FunFam Chaperone protein dnaJ 16 3 100 - -
Acco12g1186 415 Coils Coil 288 343 - -
Acco12g1186 415 MobiDBLite consensus disorder prediction 362 387 - -
Acco12g1186 415 SUPERFAMILY Chaperone J-domain 17 88 IPR036869 -
Acco12g1186 415 MobiDBLite consensus disorder prediction 389 415 - -
Acco12g1186 415 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 14 414 - -
Acco12g1186 415 ProSiteProfiles dnaJ domain profile. 18 83 IPR001623 -
Acco12g1186 415 SMART dnaj_3 17 75 IPR001623 -
Acco12g1186 415 Gene3D DnaJ domain 8 99 IPR036869 -
Acco12g1186 415 MobiDBLite consensus disorder prediction 1 28 - -
Acco12g1186 415 MobiDBLite consensus disorder prediction 362 415 - -
Acco12g1186 415 PRINTS DnaJ domain signature 20 38 IPR001623 -
Acco12g1186 415 PRINTS DnaJ domain signature 38 53 IPR001623 -
Acco12g1186 415 PRINTS DnaJ domain signature 55 75 IPR001623 -
Acco12g1186 415 PRINTS DnaJ domain signature 75 94 IPR001623 -
Acco12g1186 415 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1186 Acco-ChrAcco12 14036334 14047440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1186 11 91 C2H2 Transcription Factor Family AT1G74250 37.209 5.78e-11 62.4