Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1175 ATGGATCAAGGGCTTAAGCTTCCACTGATTCAGTCATCAGAAAGCCTAGAGGATAATTCTTCTTCTTCTTCTCTACATTCTGCAGATTTTCCAGAAATGAGAACAAAGAAAGCAGTTGGATTGAAAAGGAAGAGGATTGAAGAGAAACAGAAAGAAGTAATCCAAGTAAGGGCAAAAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTGAGAAGAGAGAGAATCAATGAGAAGCTGAGATGTTTGCAGGACCTGGTTCCAGGCTGCTACAAGACAATGGGAATGGCAGTTATGTTAGATGTCATCATAAACTATGTTCTATCACTACAACAACAGATTGAGTTTCTCTCCATGAAGCTCTCAGCAGCAAGCATGTACTTTGATTTCAACACCTACCAGTTAGATACCCTACTAGCTATGCAGAGAAGTATTGGCACAGATGGAATCCAAGGGATGGAAAGGATGGAAGGAGAAGGTTATGGAGGCTTTGCTTATTGGAATCCTACATGGCCACTTCAATAA 531 0.4105 MDQGLKLPLIQSSESLEDNSSSSSLHSADFPEMRTKKAVGLKRKRIEEKQKEVIQVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVLSLQQQIEFLSMKLSAASMYFDFNTYQLDTLLAMQRSIGTDGIQGMERMEGEGYGGFAYWNPTWPLQ 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1175 176 Gene3D - 62 125 IPR036638 GO:0046983
Acco12g1175 176 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 62 112 IPR011598 GO:0046983
Acco12g1175 176 SMART finulus 68 118 IPR011598 GO:0046983
Acco12g1175 176 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 60 131 IPR036638 GO:0046983
Acco12g1175 176 MobiDBLite consensus disorder prediction 1 29 - -
Acco12g1175 176 Pfam Helix-loop-helix DNA-binding domain 66 93 IPR011598 GO:0046983
Acco12g1175 176 MobiDBLite consensus disorder prediction 1 35 - -
Acco12g1175 176 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 26 137 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1175 Acco-ChrAcco12 13779836 13781232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1175 48 164 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 63.200 1.28e-47 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco12g1175 HLH 3.6e-05 No_clan