Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1171 ATGGAGAATTCGCCGCCGAATGGAAAGTTTCCTACGACTTCGAATTCCAGTTTCTCGGCAAAGGAGGGAAGAAGTGGGTATGAACCATCAGACACAGAGACAGAGTGTCAAGAACTTGCCCGACATAAACGAGAAAGAAAGAATCTAACTTTAGGACATGAAGAAGCCAAAGTCCTCAACTTGAGGAATAAAAATCCCATGGCACTACACAGAAAGCATCCTTCTTCAAAGTTTGAACTAGAAATCTCTTCTTCTACATCTTCAGTAGCAAGCTTAGCAGGAAGGAGAGCCCAAAGTAGATCGCCCTACCGGCCCTTTAGAGCCGCCGACGGTGAGCCTCCATATCCCATAACTGGTTTGGATAATGTTCAGACAAGTGCCAGCCCTGTGACAAAATCTGAATTTGCAAGAAGGCATACATTTCCATATCAACCTGAAAGAGAAAATCTCAATTGGAGAGCAGAGAAACCAAACCAGAGAAGAGCAATGACTGCTCCGAGGCAAAGGGGAGGAAGAGAAAGGGAAGCATCATCCCATAGGACCAATCCTTCAATCGCAGAGATCAATGAGATGGTTGCCGAGGCGAAATTCGGACAAGATTCTATTGATGATGAGCTCATAATGACAACTATAGATTCAAGTTTCGCAGGTGATATTTTCTTTTCTCGCGAATTTAATGCCATGACAAAGCAAAAGACCTTGTTAACAAAACCTTCAAAACTTGAGGTTGAAACCCAATTCAATAGCCCAAGGCCTAATAAGGACCTTCCCCAAAGAGGAGCCCCTTTTCATCATCAACATCAAAACACAGCAAATGGTAATGTCAATAAAGTGAACATACGAGGTACTTCCACATCTAGTACTACGATGTTGTCTCGACCGAGCACGGCCTCTAGTAATGGTGCTAAGAGCAAGAAGAAGAGTGGGTATTTAAGTGCTAGTGGTAGTGTGAAGGGTGATGTGAGTTCGACAAGTGCGAGCATTCAGAAATGCATGGTGAACAGGAAAAAGAACCAAGCAGAGACATGGTTTTCTTGCATGAGAAGAGTAGGCAGGTCATCGAATAAATCGCCGGAACATCGATCGGTTGATGAGGCTTCTATCATTTACAAATCTTTTGTGCTCCAAAGCCTCCCACAATTCTGGGCAGATAAGCATCAACCCACGTCATTAGATGGCTTCATTTGCCACCAACAAGAAGCTCAGATTCTCAAGGAATTAGTGTCCCAAGATGTGTGTCCTCATATTTTGCTAAAAGGACCAAATGGTTCGGGAAAAAGAGCGCTAGCAATGGCTCTTCTGCATGAAATATTCGGTGATGCAATGTCAAATCTATCTCATGATTTAAGAAATATCTCCATCCAGGAAAGGAGGCCAGTGAAGATCACTGTTCCAATAACGTCCAGCTCTCATCACATGGAGCTCAATGTAAATTTGGAACCTAATGCTAAATATGCTTTGATGGGATTAGTTAAGGAAATAAGCACTGAATCTTCGGTTACCCCTGAAGTCAGTACTTTGAATTTCAAGTCAGATTACAAAGTATTAGTTCTTTACGAGGTAGACAAGGCAGATAACAACATTCAACATATGATCAAATGGATTATAGATCGCTATTCTGATATATGCAAAATTATAGTTTGTTGCGAAGATGATGTGGCCATTCTTGAACCGGTGAAAAACCGGTTCAAAGTTATTAATGTTGATGCTCCACCAACTCATGACATTATGGATGTTCTTATTCAGATAGCAAAACAAGAAGAAATTGATTTGTCCATGAACTTTGCTGCTAAGATTGCCACCAAGTCAAAGCAGAATCTCAGGAAAGCAATCATGGCTCTTGAAGCATGCAGAGAACACAACTATCCATTTTCAGAAGAACAACCAATTCCACTTGGATGGGAGGAGATTATAATGGAAATTTCTGCAGAGATACTATCTGATCCTTCACATTCACGCTTATTCTCAATCAGAGGGAAATTACAGAAGGTTCTGGTGGATTTTGTTCACCCCAAGCTGATTCTCCGGAAACTGGTGGAACAACTCCTAAAAGGAATTGAGAGCAACTTAAAAAGGGATCTCTTCTACTGGCACGCTTATTATAACAAGAGACTCCCTCCAGGAACTACAGCTTTACTTAAACTAGAAGAATTTGTCGCCAAGTTTATGAGTATATACAGGAAAAGCACTAGCGGGCGACGGTTTGTGTAG 2211 0.417 MENSPPNGKFPTTSNSSFSAKEGRSGYEPSDTETECQELARHKRERKNLTLGHEEAKVLNLRNKNPMALHRKHPSSKFELEISSSTSSVASLAGRRAQSRSPYRPFRAADGEPPYPITGLDNVQTSASPVTKSEFARRHTFPYQPERENLNWRAEKPNQRRAMTAPRQRGGREREASSHRTNPSIAEINEMVAEAKFGQDSIDDELIMTTIDSSFAGDIFFSREFNAMTKQKTLLTKPSKLEVETQFNSPRPNKDLPQRGAPFHHQHQNTANGNVNKVNIRGTSTSSTTMLSRPSTASSNGAKSKKKSGYLSASGSVKGDVSSTSASIQKCMVNRKKNQAETWFSCMRRVGRSSNKSPEHRSVDEASIIYKSFVLQSLPQFWADKHQPTSLDGFICHQQEAQILKELVSQDVCPHILLKGPNGSGKRALAMALLHEIFGDAMSNLSHDLRNISIQERRPVKITVPITSSSHHMELNVNLEPNAKYALMGLVKEISTESSVTPEVSTLNFKSDYKVLVLYEVDKADNNIQHMIKWIIDRYSDICKIIVCCEDDVAILEPVKNRFKVINVDAPPTHDIMDVLIQIAKQEEIDLSMNFAAKIATKSKQNLRKAIMALEACREHNYPFSEEQPIPLGWEEIIMEISAEILSDPSHSRLFSIRGKLQKVLVDFVHPKLILRKLVEQLLKGIESNLKRDLFYWHAYYNKRLPPGTTALLKLEEFVAKFMSIYRKSTSGRRFV 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1171 736 MobiDBLite consensus disorder prediction 26 60 - -
Acco12g1171 736 FunFam replication factor C subunit 3 572 630 - -
Acco12g1171 736 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 379 715 - -
Acco12g1171 736 FunFam Replication factor C subunit 3 380 571 - -
Acco12g1171 736 MobiDBLite consensus disorder prediction 1 181 - -
Acco12g1171 736 Gene3D - 380 571 IPR027417 -
Acco12g1171 736 MobiDBLite consensus disorder prediction 79 95 - -
Acco12g1171 736 Gene3D - 633 726 - -
Acco12g1171 736 MobiDBLite consensus disorder prediction 119 133 - -
Acco12g1171 736 Gene3D - 573 630 - -
Acco12g1171 736 MobiDBLite consensus disorder prediction 1 23 - -
Acco12g1171 736 MobiDBLite consensus disorder prediction 139 180 - -
Acco12g1171 736 MobiDBLite consensus disorder prediction 263 321 - -
Acco12g1171 736 SUPERFAMILY post-AAA+ oligomerization domain-like 632 726 IPR008921 GO:0003677|GO:0006260
Acco12g1171 736 MobiDBLite consensus disorder prediction 243 321 - -
Acco12g1171 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 380 624 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1171 Acco-ChrAcco12 13647734 13652906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1171 381 727 Core DNA Replication Machinery Family AT5G27740 39.828 5.97e-84 268