Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1162 ATGAGACTCAGCTGCAACGGTTGCCGTATTCTCCGAAAAGGTTGCAACGATAACTGCACCATCCGTCCTTGCCTCCAATGGATCCACTCTCCCGAATCTCAGGCCAACGTTACCCTTTTCCTCGCTAAATTCTACGGCCGCGCCGGCCTCCTCAACCTCCTCGACGTTGCGCCACCCCACATCCGCCCAGCGGTGTTCAAGTCGTTGCTGTACGAATCTTGTGGGAGGATTGTGAATCCGGTGCACGGCTCGGTGGGTTTGTTCTGGGCGGGGCAATGGGATCGATGCCAGGCCGCCGTGGATGCGGTCATGATGGGGTCGGACATCGGCGGCGGCGGCTCCGGTGGGGTGTTGGTGGGTTCGGATTCGCCAGGGGGTGATCAGGGCTTTGTGGCTGCTTCCGATATACGCCACGTGGCGAGAGAGGAGAAGGAGAAAGGCGAGGTGAACAAGGTGAGAGGTAGAGGCCGGTTCAAGAGGAATAATGGGAAATTGATAAAGCCGAAGGCCAGAGTGGGTTGGGTCGACTCGTCGGCTCTGTGGAAGCTGGTTCAGGACACGTCGGAGGGTGACAGCGTGTTCTCCGCCCAAACCGTCGAGGCCAGCTTGGCGAACCGGGAGAGTAGCAGGAATGGTGGAGATAAAGATGTGAACCGGACCCAAAAAGCTCCGGTTAATTTGAATTTGAGCCTTGGAAAAGACTAA 705 0.5745 MRLSCNGCRILRKGCNDNCTIRPCLQWIHSPESQANVTLFLAKFYGRAGLLNLLDVAPPHIRPAVFKSLLYESCGRIVNPVHGSVGLFWAGQWDRCQAAVDAVMMGSDIGGGGSGGVLVGSDSPGGDQGFVAASDIRHVAREEKEKGEVNKVRGRGRFKRNNGKLIKPKARVGWVDSSALWKLVQDTSEGDSVFSAQTVEASLANRESSRNGGDKDVNRTQKAPVNLNLSLGKD 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1162 234 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Acco12g1162 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 211 - -
Acco12g1162 234 MobiDBLite consensus disorder prediction 203 234 - -
Acco12g1162 234 Pfam Lateral organ boundaries (LOB) domain 4 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1162 Acco-ChrAcco12 13481354 13482343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1162 1 161 AS2 family AT1G67100 58.025 2.34e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco12g1162 LOB 1.8e-22 No_clan