Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1132 ATGCAAAGCTTCAAGACCTCTCAATCTACCCCTCAACAACTCTATTGCCACCCCTCCTTCTTTCTTCGAGGAGATGACACCGGCAGAAATCCTACTCGTTTCTCTGATCTTGGAGAGCTTCAACATTCTGTTTCTCCCTTTCAGCATGACGATGCTGTTGATTTAAGCTCAAGCTCTATGTTTACTGTTAAGTCCAGCAATGTCGCTGTTGTTCCTATTAACTTGCAGTACGGGACATTAAGCTCGAACATTGGATCTTCAGAAATAGCTTCAACAGGGGCTGGGTGCCTTAATACAGGGCCGCATCTCATATATCAGAAGGGATTCACGGCTGCGGGGGCCGCCATGCCGGCGGAAAACGGACATATGGAGAATTGGGGTGATTCCGGCATGGTAGATAATAGCCAACACACTGATACTTCCACAGATATCGACCCCGATGATAAAAACCAATGTAATAATAGAGTTCAGCCTGGCAGAGCTCTGGTCGCTGATTCCATGGAACAACCTAAGGCCAACCCTGAGGATCCAAAGACTCTTCGTAGGCTCGCCCAGAATCGAGAGGCTGCAAAGAAGAGCCGGTTAAGGAAAAAGGCATATGTACAACAATTGGAAAACAGTCGTGTGAGACTAGCACAGCTAGAGCAAGAGCTCCAACGCGCACGTCAGCAGGGAATGCTTGTTGCAAGTGGACATCCTGGTGATCATAGTCATTCAATGGTCGGAAACGGTGCCTTAGCATTTGACATGGACTATGCACGCTGGGTCGATGAGCATCAGCAGCTGATAAATGAGCTAAGAACATCTGTAAATTCTCACATGGGAGATAATGAACTGCATATAATTGTCGAGGGTGTTACGGCGCATTACGATGAATTATTTAGGTTAAAAAGCATAGGAGCAAAGGCCGATGTATTTCACATACTCTATGGTACATGGAAGACTCCTGCAGAAAGATGTTTTATGTGGTTAGGTGGGTTTAGATCATCTGAACTTCTAAAGGCACTGAGGAACCAGCTTGAGCCATTAACAGATCAGCAAATGATGGGCTTGTATAATTTGCAGCAGTCTTCGTCACAGGCCGAGGATGCTTTAACACAAGGCCAGGACGCATTGCATCAATCTCTTTCAGAGATACTTTGCTCAGCCTCCGCTGGTTCTGGAAATGTTGCTGAATACATGGCTCAAATGGCACTTGCTATGAGCAAACTTGCCACATTGGAGAGTTTCCTACATCAGGCTGATCTCTTGAGGCAACAAACGCTGCAACAACTGCAGAAAATCTTGACCACGCGACAAATAGCACGTGCATACCTCGTGATAAATGACTACATTTCACGACTACGAGCACTTAGTTCATTATGGTCAGCTCGCCCAAGAGAGGAGTAG 1389 0.4622 MQSFKTSQSTPQQLYCHPSFFLRGDDTGRNPTRFSDLGELQHSVSPFQHDDAVDLSSSSMFTVKSSNVAVVPINLQYGTLSSNIGSSEIASTGAGCLNTGPHLIYQKGFTAAGAAMPAENGHMENWGDSGMVDNSQHTDTSTDIDPDDKNQCNNRVQPGRALVADSMEQPKANPEDPKTLRRLAQNREAAKKSRLRKKAYVQQLENSRVRLAQLEQELQRARQQGMLVASGHPGDHSHSMVGNGALAFDMDYARWVDEHQQLINELRTSVNSHMGDNELHIIVEGVTAHYDELFRLKSIGAKADVFHILYGTWKTPAERCFMWLGGFRSSELLKALRNQLEPLTDQQMMGLYNLQQSSSQAEDALTQGQDALHQSLSEILCSASAGSGNVAEYMAQMALAMSKLATLESFLHQADLLRQQTLQQLQKILTTRQIARAYLVINDYISRLRALSSLWSARPREE 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1132 462 Coils Coil 197 224 - -
Acco12g1132 462 ProSiteProfiles DOG1 domain profile. 245 458 IPR025422 GO:0006351|GO:0043565
Acco12g1132 462 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 176 220 IPR004827 GO:0003700|GO:0006355
Acco12g1132 462 CDD bZIP_HBP1b-like 178 230 - -
Acco12g1132 462 PANTHER TRANSCRIPTION FACTOR TGA9 122 462 - -
Acco12g1132 462 SUPERFAMILY Leucine zipper domain 178 221 IPR046347 GO:0003700|GO:0006355
Acco12g1132 462 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 181 196 IPR004827 GO:0003700|GO:0006355
Acco12g1132 462 Gene3D - 177 228 - -
Acco12g1132 462 SMART brlzneu 174 232 IPR004827 GO:0003700|GO:0006355
Acco12g1132 462 Pfam bZIP transcription factor 178 217 IPR004827 GO:0003700|GO:0006355
Acco12g1132 462 MobiDBLite consensus disorder prediction 120 181 - -
Acco12g1132 462 FunFam BZIP family transcription factor 177 226 - -
Acco12g1132 462 Pfam Seed dormancy control 263 337 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1132 Acco-ChrAcco12 12711315 12714666 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1132 3 461 bZIP Transcription Factor Family AT1G68640 57.082 6.03e-158 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco12g1132 DOG1 3.2e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1132 12 12711315 12714666 Acco12g1132 12 12711315 12714666 ECH