Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1126 ATGGGGTTGACCGATTACATAGAAGCATTAGAATCAGAACGCACCATTGAAGCCTGTAGGCCACAGCTGCGTGGAAGGAGGACAACGTCGCCGGAGCAGAATTTGCAGCGCAGACAATCGGAGAAGACATCACGGGAATTGGAAGGACCTGTTCTGGAGGGGTTCAAACCAATCAAGAAGAAAAGGATTTCCAATGACGATGAAGAAGAAGATGAGCAACACTCGCACAAACCCAAGATTTCCAAACATCATAAGTCGGATTGGCTTAGATCCGTCCAACTCTGGAATAATAATCCACAATCCCCACTTAACCAGGATATTCCTGGTCGGAAAACGTCGGTTTTGGAAGTAATTAAGGGAGATGGAGGTGCTTTTCAGCCATTCCACAGAGAAGCAACAAGTGTTGGAAAGACTACTACTGCATCAACGGCCAATAAAGCATCCTCCTCGCCAGCGCCGGCGCCTCTACCAGCCGCCGGGAGCAACAAGAAAGAAGGACTTAATAATAATAATAATAATAAAAGGAAGCAACGACGGTGCTGGTCTCAGGAACTGCATAAGCGCTTCTTGAACGCCCTTCACCAACTCGGTGGAGCAGATTCTGCAACACCGAAGCAGATAAGGGAACTTGTGAAGGTTGATGGCCTAACAAATGATGAAGTAAAGAGTCATTTACAGAAATTTCGATTGCACACGAGGAGGTCAAGCCGATTGATACAGAACAATGGCGATTCCCAAATGGCTCCATTTGTATTGGTGGGGAACTTTATAGTGCAACAACCGCCGCCGGGACATGAAGCGGCGGCGGTTACTTCAAAGGCTTCAACAGAGACAACGATGCAGCTGCCTGGGATTTATGCGCCGGTGGCATCACATGCAACTGGGATGGCACGGGCGGCGGCTCCGACAAAGGGTAAGGAGAGGCAACTGGATTTGGAGAATTGTTGTTGGAGACGTTCAAATTCAGAGGACAGCGAAATGGTGGCTGATCATTCAAATTCAGCATCGTCTTCCTCCATACTTACTTGA 1029 0.481 MGLTDYIEALESERTIEACRPQLRGRRTTSPEQNLQRRQSEKTSRELEGPVLEGFKPIKKKRISNDDEEEDEQHSHKPKISKHHKSDWLRSVQLWNNNPQSPLNQDIPGRKTSVLEVIKGDGGAFQPFHREATSVGKTTTASTANKASSSPAPAPLPAAGSNKKEGLNNNNNNKRKQRRCWSQELHKRFLNALHQLGGADSATPKQIRELVKVDGLTNDEVKSHLQKFRLHTRRSSRLIQNNGDSQMAPFVLVGNFIVQQPPPGHEAAAVTSKASTETTMQLPGIYAPVASHATGMARAAAPTKGKERQLDLENCCWRRSNSEDSEMVADHSNSASSSSILT 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1126 342 MobiDBLite consensus disorder prediction 38 77 - -
Acco12g1126 342 NCBIfam myb-like DNA-binding domain, SHAQKYF class 176 231 IPR006447 GO:0003677
Acco12g1126 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 173 233 IPR017930 -
Acco12g1126 342 MobiDBLite consensus disorder prediction 124 179 - -
Acco12g1126 342 MobiDBLite consensus disorder prediction 132 150 - -
Acco12g1126 342 SUPERFAMILY Homeodomain-like 174 234 IPR009057 -
Acco12g1126 342 Coils Coil 164 184 - -
Acco12g1126 342 MobiDBLite consensus disorder prediction 327 342 - -
Acco12g1126 342 MobiDBLite consensus disorder prediction 321 342 - -
Acco12g1126 342 FunFam Two-component response regulator 171 236 - -
Acco12g1126 342 Pfam Myb-like DNA-binding domain 178 227 IPR001005 -
Acco12g1126 342 Gene3D - 175 233 - -
Acco12g1126 342 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 14 307 IPR044787 GO:0003700|GO:0006355
Acco12g1126 342 MobiDBLite consensus disorder prediction 18 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1126 Acco-ChrAcco12 12500033 12502003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1126 5 290 G2-like Transcription Factor Family AT1G68670 42.771 5.66e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco12g1126 Myb_DNA-binding 7.7e-06 CL0123