Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1119 ATGGCTGGAACCTCGTGGTTGGTGGACAAAAGTAGAATAGCAACCAAAATAAAGAGTGCTTCTGGGGCATTTGATCCTGAGAAGGTTAAATGGAAAAGCAATCCTACCAGAGCTTGCCCTAATTGTCAGAGCATTATCGATAACAGCGATGTAGCACAAGAGTGGCCTGGATTGCCAAAGGGTGTGAAATTTGATCCATCAGATCAAGATATAATATGCCACTTGCTTGCTAAAGTTGGTGTGGAAAATTCAAGACCTCATCCTTTCATTGATGAATTCATCACTACTCTTGAAGTGGATGATGGAATTTGTTACACTCATCCAAAACATTTACCAGGTGTTAATCAAGATGGAAGTGCAACCCACTTCTTCCATAGAGCAATCAAGGCTTACAATACAGGCACCCGAAAGCGTAGGAAAATACATGGCCAGGATTTTGGTGATGTGCGCTGGCACAAGACTGGAAGAACTAAACCCGTAGTGTTGGATGGGGTTCAGGAGGGCTGTAAAAAGATTATGGTTCTTTATATGACCTTGGTTAGAGGAGGTAAAGCAGAGAAAACTAATTGGGTTATGCATCAGTATCACCTAGGAACACAAGAGGATGAGAAGGAAGGAGAGTATGTTGTCTCTAAAGTTTTTTACCAGCAGCAGCAGGTTAAATCGGGGGATAAAGATGACCTGGATATTCCTGCAAGAACCTTGGATGTTCCTGAAAGTTCCGAAAACATTGAAGGAGGAACGGTGCCAGTTGATCCGGTCACCCCCAAATCAGTGACCCCTGATCCACCTTATGACAAAAGACCACATTCAAGCATTGACATGGGACTAGAATCTCAATTTGTTCCTCAGGATCCTCCAATTTATTGTGTGGAAGATGCGTCTGAATCATGTTGTGAAGAACTAACAACTGATGTGCCCAAGGAAGAAAATCAAAATAGTAATGAAGGAACAGTTAATAATGAAAATGACTTTGCTATTGAAGAACCTAAATGGTGGGATAGTGAGTCACAGCATCTTTTGAATTCACAGCAACTCGTTGAAGCATTGTCCTTGTGTGAGGACCTCCTTTGCAGCCAATCTCCCAATAGAGATGACACTAGTGAAGAACATAAGGACCGACCTGGTCTTGCTGTCTATGCTCAACTAGGACCAGAGCATCTGAAAAAGGATCTTGAAGAATGCCAAAATCTGTCAAATATAGAACTTGATACACCTCCTGACTTTCGACTAAGCCAGCTGGAGTTTGGTTCACAAGATAGCTACATTTCCTGGGGTGGCAGCAAGGCAGGGAACTGA 1299 0.4273 MAGTSWLVDKSRIATKIKSASGAFDPEKVKWKSNPTRACPNCQSIIDNSDVAQEWPGLPKGVKFDPSDQDIICHLLAKVGVENSRPHPFIDEFITTLEVDDGICYTHPKHLPGVNQDGSATHFFHRAIKAYNTGTRKRRKIHGQDFGDVRWHKTGRTKPVVLDGVQEGCKKIMVLYMTLVRGGKAEKTNWVMHQYHLGTQEDEKEGEYVVSKVFYQQQQVKSGDKDDLDIPARTLDVPESSENIEGGTVPVDPVTPKSVTPDPPYDKRPHSSIDMGLESQFVPQDPPIYCVEDASESCCEELTTDVPKEENQNSNEGTVNNENDFAIEEPKWWDSESQHLLNSQQLVEALSLCEDLLCSQSPNRDDTSEEHKDRPGLAVYAQLGPEHLKKDLEECQNLSNIELDTPPDFRLSQLEFGSQDSYISWGGSKAGN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1119 432 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Acco12g1119 432 FunFam NAC domain-containing protein 8 67 220 - -
Acco12g1119 432 MobiDBLite consensus disorder prediction 238 273 - -
Acco12g1119 432 SUPERFAMILY NAC domain 44 216 IPR036093 GO:0003677|GO:0006355
Acco12g1119 432 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
Acco12g1119 432 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
Acco12g1119 432 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 396 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1119 Acco-ChrAcco12 12392435 12396319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1119 5 223 NAC Transcription Factor Family AT4G28500 51.111 8.27e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco12g1119 NAM 8.2e-20 No_clan