Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1114 ATGATGGCTCGGCGAAGAGTGATTGCCTGGGGAAGAGTTCGAAAATCTCTTCAAGCTCTGTTTTCTTATGCCTTACTCTTTTCATTTACTCTCCTTCTTACTCTCAAGATTGACAATGTCGTCCATTACTCGTGGTGGATTATATTTTCACCTCTCTGGCTTTTTCATGGGGTTGTATCTCGAGGTCGGTTTTCCCTGCCTGCTCCTTCAATGCCTCATGATCGCCATTGGGATCCTTGTCATACCATCATGTCAATTCCTTTTCTTGTTGCTTTTGAGCTACTTCTTTGTGCACATCTTGAGAGCTCTTATGAGATCAATTTAAAGATAGTTTTCTCACCCTTGTTGGCTTTTGAGGTGGCGGTTATGATTGATAACTTTAGGATTTGTAGGACATGTCTGCAAGCTGATGAAAATATGATCGAAGAAGCAATGCGGATAACCTTTCCTCACTTCTGCACTGCAATATCCATGGCCTTCTTTATTGCTGCTACAGTGTTGACCCTTTGTAAGATATGTGGTGATGAAGCTGCACTAGGCTGGTGGAAAATATTTAAAGTCTTTGGTGTTGGAGAGTGCATTGCCATTTTTCTTTCTACAAAGTGGCAAAATCCAAGAATTCATGGGAATGATGAGATAACTGAATCATCGTCATTATTAATAAGAAACCAGGACTTGGGTAGCAGCTTAGATATTCAGCAAAGTGGGTCAAGCAATCTGGAGAACATCGGTGGGCATATTATGAAGATTCCTATCATTGCTTTCCAAATACTGCTGATTATGCGTTTAGAGGGAACTACTGCTAGTGCCAGAAATATGCCGTTTCAGACTGTTTTTTCTCCCCTTTTTATGTTGCAAGGGGCTGTTGTTTTATTCGCTGCATTCAGATTAGTGGAAAATGTAGTACTTAGACTTCACCGTGGAGAAATTTCTGCAAGATACTTGGCTGTTTCATCAAAAGCCCGGGATTTCTTTGGTTTCATAGATCATGGGTCAAGGTGGCTAGGTTGGTGGTCGATAGATGAAGCAAGCAGAGAGGAAGAAGCTAGAATGTACTATGATGGGAGTTCAAAGTATAATAGTTTCTCCCCTGATAAGGTGAAGAAAATGCCTAATGAAGCTCTTGCTGAGGAGATTCTTAGGCTACAGGGTGCATTGACCGAGCAGACCAATGCTGCAAAATCTAGCCACCAGGAGTATGAAAGACTTCTCAATGAAAAGATCCTATGCAGAGTTTGCTTTGATATGCAGATAAATGTGATTCTTCTTCCTTGCAGGCACCATACCATTTGCAGCAATTGCCGCGAAAAATGTTCGACGTGTCCTGTCTGCCGTGTCCCCATTGAAGATGTAATTCCTGTATAA 1365 0.4168 MMARRRVIAWGRVRKSLQALFSYALLFSFTLLLTLKIDNVVHYSWWIIFSPLWLFHGVVSRGRFSLPAPSMPHDRHWDPCHTIMSIPFLVAFELLLCAHLESSYEINLKIVFSPLLAFEVAVMIDNFRICRTCLQADENMIEEAMRITFPHFCTAISMAFFIAATVLTLCKICGDEAALGWWKIFKVFGVGECIAIFLSTKWQNPRIHGNDEITESSSLLIRNQDLGSSLDIQQSGSSNLENIGGHIMKIPIIAFQILLIMRLEGTTASARNMPFQTVFSPLFMLQGAVVLFAAFRLVENVVLRLHRGEISARYLAVSSKARDFFGFIDHGSRWLGWWSIDEASREEEARMYYDGSSKYNSFSPDKVKKMPNEALAEEILRLQGALTEQTNAAKSSHQEYERLLNEKILCRVCFDMQINVILLPCRHHTICSNCREKCSTCPVCRVPIEDVIPV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1114 454 SUPERFAMILY RING/U-box 401 450 - -
Acco12g1114 454 ProSiteProfiles Zinc finger RING-type profile. 410 445 IPR001841 -
Acco12g1114 454 Pfam Zinc finger, C3HC4 type (RING finger) 408 451 - -
Acco12g1114 454 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 9 454 - -
Acco12g1114 454 Pfam Transmembrane Fragile-X-F protein 35 284 IPR019396 -
Acco12g1114 454 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 384 454 IPR013083 -
Acco12g1114 454 Coils Coil 386 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1114 Acco-ChrAcco12 12290127 12294843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1114 12 454 C3H Transcription Factor Family AT1G73950 53.319 4.23e-169 481