Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1070 ATGGCACAAGATACTTCTGCTGTTGATTCACATCACAGGCGCCCTGGTCTATTGAAAGATCAAGTCTTCTTGGTTAAAAGGAAAGACTGCGATCGCTCTGAGATTGCTCCTATCCAAGATCAACTATCGTTTTCGAAGGGTTTTTTTGTAGTAATCCGTGCATGCCAGTTGTTGTCCCAAAATAACGATGGAATAATATTGGTAGGGGTGGCTGGTCCTTCAGGGGCTGGGAAGACTGTATTTACTGACAAGATAGTCAATTTCATGCCCAGCATTGCAGTCATTTCGATGGACAATTACAATGATTCCAGTCGAATTGTTGATGGAAATTTTGATGATCCACGCTTGACAGACTATGACACATTGCTCCAGAATCTACAAGATTTAAAGGCAGGAAAGTCAGCTCAGGTTCCGATCTATGATTTCAAGTCCAGTTCTCGTATAGGATACAGGACAGTTGAAGTCCCAAGCTCCCGAATAGTGATCATAGAGGGTATCTATGCTTTGAGTGAGAAGTTGCGACCTTTACTAGACCTTCGTATATCTGTTACAGGTGGAATTCATCTTGACCTAGTCAAGCGAGTTATGCGTGACATTCAACGTGCCGGTCAAAAACCTGAAGAAATCATTCATCAAATATCTGAAACGGTATATCCAATGTACAAGGTCTTCATCGAGCAAGATCTGCAGACAGCACATATCAAAATAATCAACAAGTTCAATCCATTTACCGGGTTCCAGAGTTCTACTTACATATTGAAATCCGCAAGGAATGTGACAGTTGAACAAATTAAAGCTGTTTTCTCTGGAGATTTTAAGGAAACAAAGGAGGAGATTTATGACATATATCTTCTACCGCCTGGTGAAGAACCAGAAACTTGCCAATCTTATTTACGGATGCGGAATAAGGAGGGGAAATACTGTCTAATGTTTGAGGAATGGGTGACAGATAGTCCATTTGTCATTTCACCAAGAATAAGTTTTGAGGTTCGTGTGCGGCTCCTTGGTGGCCTGATGGCCCTGGGATACACAATAGCTACCATTCTGAAAAGAAACAGCCATGTATTCTCTGATGATAGGGTGTCTGTGAAACTAGATTGGCTTGAGCAACTTAATCGACAATATGTTCAGGTGCAAGGAAAAGATCGCTCAGCTGTAAAATACATAGCCCAGCAGCTTGGCATGGAAGGTTCCTATATTGCTCGTACATACATTGAGCAAATACAACTGGAAAAGATTGTAGATGAGGTTATGGCCCTTCCAGATGATTTAAAAACAAAGCTGGGCCTAGATGAGGATTTGGTGTCTAGCCCAAAAGAAGCACTTTCTAAAGCCTTTGCAGATAGAATTCCTGTGAAAAAAACGCTAATGAGTGGTATGTCCCGGTCGTATACAAGCCAAAGGGACAAAAATCTACTTAAACATACTCAATATGGTGCCGGCAACAAAGGGTTTGGTGAAAGAAATCCAGATTCCTCCATAGCGCTAACAAATAAGCTTTCAGGACAAATTTCTTCTCTCAATGATAGAATGGATGAGTTTACAAGCCGTCTTGAAGAGCTGAATTCCAAGTTAAGCATCAATAAAAAATTTCCAAGCCAACAAACCAACCAAGCTGAAGGCTGCAGTGGTTCTGCTCCCACCTCTCACTTCATCACCAGTTTGGAAAATGGTTCTTTAACTGGAGCTATTATGAAGTCCTCATCTTCATTGCAATTAGCTAAGGAGTTACCTTTAATGGATGAGATATCTGGTATTGCAAGAGGGCAGCGCCATATCATGCAGAAAATAGACACTCTGAATAGCCTTATCCTTGGAGTTAGAAACATGGGAGAAAGGTCTCACCAAACAAGAACCAACAGGGCAATCACGGCTTCTGCTTCAGAATCCACTTCAGTTCGTACCCTACTTGCTATCACTTTTGGTTGTGTTGGGTTATTCGTGGTGAAGGTTTGGGTTTCTAGAACCTGA 1971 0.416 MAQDTSAVDSHHRRPGLLKDQVFLVKRKDCDRSEIAPIQDQLSFSKGFFVVIRACQLLSQNNDGIILVGVAGPSGAGKTVFTDKIVNFMPSIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNLQDLKAGKSAQVPIYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRISVTGGIHLDLVKRVMRDIQRAGQKPEEIIHQISETVYPMYKVFIEQDLQTAHIKIINKFNPFTGFQSSTYILKSARNVTVEQIKAVFSGDFKETKEEIYDIYLLPPGEEPETCQSYLRMRNKEGKYCLMFEEWVTDSPFVISPRISFEVRVRLLGGLMALGYTIATILKRNSHVFSDDRVSVKLDWLEQLNRQYVQVQGKDRSAVKYIAQQLGMEGSYIARTYIEQIQLEKIVDEVMALPDDLKTKLGLDEDLVSSPKEALSKAFADRIPVKKTLMSGMSRSYTSQRDKNLLKHTQYGAGNKGFGERNPDSSIALTNKLSGQISSLNDRMDEFTSRLEELNSKLSINKKFPSQQTNQAEGCSGSAPTSHFITSLENGSLTGAIMKSSSSLQLAKELPLMDEISGIARGQRHIMQKIDTLNSLILGVRNMGERSHQTRTNRAITASASESTSVRTLLAITFGCVGLFVVKVWVSRT 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1070 656 ProSiteProfiles CYTH domain profile. 245 410 IPR023577 -
Acco12g1070 656 Pfam CYTH domain 269 404 IPR023577 -
Acco12g1070 656 PANTHER URIDINE KINASE 32 423 - -
Acco12g1070 656 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Acco12g1070 656 CDD UMPK_like 67 239 - -
Acco12g1070 656 Coils Coil 504 524 - -
Acco12g1070 656 Gene3D - 66 255 IPR027417 -
Acco12g1070 656 SUPERFAMILY CYTH-like phosphatases 272 407 IPR033469 -
Acco12g1070 656 PRINTS Uridine kinase signature 132 147 - -
Acco12g1070 656 PRINTS Uridine kinase signature 65 82 - -
Acco12g1070 656 PRINTS Uridine kinase signature 188 198 - -
Acco12g1070 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 236 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1070 Acco-ChrAcco12 11449376 11456608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1070 66 225 PRT Gene Family AT5G40870 28.402 6.86e-17 82.0