Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1064 ATGGTTAAAAGTGACGTCAGAGGGTTTCATTATCCAGCACCTGAAAATCCCCTCTTAGTTTCTCCAAACTTTGGCTTGTTTCAACATGGTGATGTCCAAAACCAGCTTCACCTGAACACCCTCTTGAGCAATTTGCCAAACTGCTACTTCCCTCCTGGTTCGGGAAGCCTCGAGTTTATCCCTCCTCTTCCACCTACTTCTTCAAGCTGCCTCAGCAGCAACTCAACTTCTGATGAAGCTGATGAGATTCAGCTCAGCATCATTGATGAAAGGAGGCAGAGACGAATGATATCGAATCGAGAATCGGCTAGGAGGTCCAGGATGAGAAAGCAAAAGCACTTGGATGAACTGTGGTCACAGGTGGTGAGGCTCAGGAATGAGAATCACAATCTCATTGACAAACTGAACCATGTGTCTGAGTCACATGATAGAGTTCTTCTGGAGAATGCACGCCTCAAGGAAGAAACTTCTGATCTTCGTCAACTGCTAGCGGACCTGAAAATTAGCTCTTCTTTTGCTGACATCATGAGAGATATTGATGAACTCAGAGCTGAGCTCTCTAACTAA 567 0.4533 MVKSDVRGFHYPAPENPLLVSPNFGLFQHGDVQNQLHLNTLLSNLPNCYFPPGSGSLEFIPPLPPTSSSCLSSNSTSDEADEIQLSIIDERRQRRMISNRESARRSRMRKQKHLDELWSQVVRLRNENHNLIDKLNHVSESHDRVLLENARLKEETSDLRQLLADLKISSSFADIMRDIDELRAELSN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1064 188 CDD bZIP_plant_GBF1 92 143 IPR045314 GO:0003700|GO:0006355
Acco12g1064 188 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 31 172 IPR044521 -
Acco12g1064 188 Coils Coil 149 169 - -
Acco12g1064 188 FunFam BZIP transcription factor 89 140 - -
Acco12g1064 188 Pfam bZIP transcription factor 91 146 IPR004827 GO:0003700|GO:0006355
Acco12g1064 188 SMART brlzneu 87 151 IPR004827 GO:0003700|GO:0006355
Acco12g1064 188 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 109 IPR004827 GO:0003700|GO:0006355
Acco12g1064 188 Gene3D - 89 144 - -
Acco12g1064 188 SUPERFAMILY Leucine zipper domain 91 141 IPR046347 GO:0003700|GO:0006355
Acco12g1064 188 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 89 152 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1064 Acco-ChrAcco12 11350116 11350682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1064 65 179 bZIP Transcription Factor Family AT3G30530 66.667 1.55e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco12g1064 bZIP_1 4.6e-13 CL0018