Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1003 ATGCATCTCTCCTTCTTTTTAACTACTATCAAAACCTGTTCTTCAGCACACATCCCTCCAGATAGAATCCTCCTCCATTGTGGCTCTTTGGAAGCATCACAATTCAATGGAGCAAAATGGATCGGTGACACTCAAACCCATTTTTTGCCTCCAGCATATGACAAAACGTCTTCTGCACGATTCATCCCAAACCTTAGCTCTAAAGCACCAGAGATCCCATACTCAACCGCACGCCTGATTCAATCTCCATTCACATACTCTTTCCCCTTCTCACGTCCTTGTCCTTATACTCTGTTAAGTAATTTCACCCCATCTATTGCTGCTGATGAAACCAACTCAATCTTCTTCACTAAGGATTTCTTGGTCAACGTCAAGGAAAAGAGACTTGACATAATTTTCATCCCAACTTCCCTAGTTTCCAATGCACTTGCCTACATTAATGGGATTGAGATCTTCCCAGTGCCTCTTAGTATTTACTTTCCAGGTCCCCACATTCCCCTTCCTTTTCTTGGGCATCAGGCACCTTTATTCATTAATGATGACTATGCTCTTGAAATGTTTTACCGGGTTAATGTCGGAGATGGTGATATTTCTAGTTATGTTACAAATGTCTTTGGGACATGGAGCTATGATTTAAGCTACATATCTGGATTTAAACACGGAAGTATCCTAGATGTTAGGCCTCGTCCAGATATAATAAATTACAACTCTTCCAAATCCAAGGATTATCATTATGCAGCACCAGAAGAACTTTATTGCACTGCCAGAACAATGGGTATCGATGAAAATAACATGAGCTACAACTTAACGTGGTCATTCCCTGTTGATTCTCGCTTCAAATATCTTGTTAGGCTTCATTTCTACGAGATGTCCATGGAGATAACCCAGGTCAACCAAAGGGTGTTCAAGGTATATGTCAACAACCAAACAGCAGAGGAGAGCATGGACTTAGTTGCTTTGACTGGTGCGCCACTTGTTACTCTATACAGAGACTATGTGGTTATGGCTCCTATGGGAAATGGGAGGAAGCAAAATATGCTAATTTCCCTTCACCCCAACATGAAGTCAAAGCCCAAGTATGCTGATGCCATACTGAATGGCATTGAGATCCTCAAGTTAAGCGACAGTAGCCACAATCTAGCAGCTAGAGTTCAACTGAAAATGGAACAAAAGGAGAAGAAAACTCGATACAACGTTATTGTTGGAAGCACTATAGGTGAGGTCCCATCAAACTCAGCAGGAAAAAGTCCCAAAAATTTGCATTTAATGATCAGTTCAGGCCAATGCCACCGATTCACGTTAGCTGAGATCAGAAAAGCCACGAACAACTTCAGCCAGGCTTTGGTCATTGGGAAGGGCGGCTTTGGCAAAGTTTACAAAGGATTGATCCACGATGGAGTCACCAATGTGGCAATAAAGCGCTGTAATCCTGCTTCCCACCAAGGATATAGAGAGTTTAAAAACGAGATCAATTTGTCATCCTCATTCTGTCACAAGAAGTTAGTGTCCCTGCTGGGCTACTGTCAAGAGGACAATGAGCTTGTAATTGTCTATGAATACATGGCTGAAGGCACTCTTCGTGATCAGTTATACAAAAAACAGAAACAGCCACTGACTTGGAATAAAAGAATAGAGATTTGTATTGCTGCAGCTAGAGGGTTACATTACCTCCATACAGATTTTGGGTTTTCTAGAATTGGCCCCACCTCTGCATCCAGCAGCCATGTTAGCACTGATGTGAAGGGTACAGTTGGCTATTTAGACCCAGAATACTATAGGAGAGGAATGCTGACAGAAAAATCTGACGTTTATTCATTTGGGGTGGTGCTGTTTGAAGTGTTCTGTGGAAGGCCAGCAGTGAATCCTATCGAAGTAGAAGAGAATGGTGAGAAGATTGGCTTGGTTGAGTGGGCTTGGCAGTGTCATCTCTCTGGAGAATTTGATCGAATGGTGGACCCACATTTAAAAGGAACAGTTTCATCAGGTTGCCTCAAGGAATTTGTAGATATTGGCATCAAGTGCTTGGCAGAAAAGAGCACAGATAGGCCAACTATGGGGGAAGTGCTTAGTAATTTGGAGAAGCTTCTGTTATTGCAGGAGAGTTTGGATGGACAAGAAATAAATGGAGATGCATGTTTACGTATAGGGATAAATGAGAATACCGCAAAATCTTCATCAATCAAAGAAGGGTTCAGGAAAGGCGTCCAGAAATATGAAGGGTTCAAGAAAGATTACCTCTTAGAATCTTCATCACCACCGGGTTGGGCTCTTTCCTGTTGGCTGTTGCTTCTGCTCCTTCTCGCCGTCTTCCTCTCCGACCTCTCCTCCATTCTCATTTCTCATTATTCACCGAAGCTCGCGCTGCCAATCTTCTCTAAGTCTCGCTACCTGTTACTGTTTCTTCACACTTCACCAAATCGTGAAAGCATTATTCTCTCGCCTCTATAG 2448 0.4261 MHLSFFLTTIKTCSSAHIPPDRILLHCGSLEASQFNGAKWIGDTQTHFLPPAYDKTSSARFIPNLSSKAPEIPYSTARLIQSPFTYSFPFSRPCPYTLLSNFTPSIAADETNSIFFTKDFLVNVKEKRLDIIFIPTSLVSNALAYINGIEIFPVPLSIYFPGPHIPLPFLGHQAPLFINDDYALEMFYRVNVGDGDISSYVTNVFGTWSYDLSYISGFKHGSILDVRPRPDIINYNSSKSKDYHYAAPEELYCTARTMGIDENNMSYNLTWSFPVDSRFKYLVRLHFYEMSMEITQVNQRVFKVYVNNQTAEESMDLVALTGAPLVTLYRDYVVMAPMGNGRKQNMLISLHPNMKSKPKYADAILNGIEILKLSDSSHNLAARVQLKMEQKEKKTRYNVIVGSTIGEVPSNSAGKSPKNLHLMISSGQCHRFTLAEIRKATNNFSQALVIGKGGFGKVYKGLIHDGVTNVAIKRCNPASHQGYREFKNEINLSSSFCHKKLVSLLGYCQEDNELVIVYEYMAEGTLRDQLYKKQKQPLTWNKRIEICIAAARGLHYLHTDFGFSRIGPTSASSSHVSTDVKGTVGYLDPEYYRRGMLTEKSDVYSFGVVLFEVFCGRPAVNPIEVEENGEKIGLVEWAWQCHLSGEFDRMVDPHLKGTVSSGCLKEFVDIGIKCLAEKSTDRPTMGEVLSNLEKLLLLQESLDGQEINGDACLRIGINENTAKSSSIKEGFRKGVQKYEGFKKDYLLESSSPPGWALSCWLLLLLLLAVFLSDLSSILISHYSPKLALPIFSKSRYLLLFLHTSPNRESIILSPL 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1003 815 ProSitePatterns Protein kinases ATP-binding region signature. 450 473 IPR017441 GO:0005524
Acco12g1003 815 ProSiteProfiles Protein kinase domain profile. 444 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g1003 815 Pfam Malectin-like domain 101 372 IPR024788 -
Acco12g1003 815 SUPERFAMILY Protein kinase-like (PK-like) 418 693 IPR011009 -
Acco12g1003 815 Pfam Protein tyrosine and serine/threonine kinase 559 692 IPR001245 GO:0004672|GO:0006468
Acco12g1003 815 Pfam Protein tyrosine and serine/threonine kinase 449 558 IPR001245 GO:0004672|GO:0006468
Acco12g1003 815 Gene3D Phosphorylase Kinase; domain 1 408 520 - -
Acco12g1003 815 FunFam receptor-like protein kinase FERONIA 409 520 - -
Acco12g1003 815 PANTHER OS07G0166700 PROTEIN 429 559 IPR045272 GO:0004714|GO:0006468
Acco12g1003 815 Gene3D - 23 115 - -
Acco12g1003 815 Gene3D - 182 374 - -
Acco12g1003 815 Gene3D Transferase(Phosphotransferase) domain 1 521 709 - -
Acco12g1003 815 FunFam FERONIA receptor-like kinase 182 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1003 Acco-ChrAcco12 10353148 10356730 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1003 19 744 Receptor kinase-like Gene Family AT3G51550 38.836 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Acco12g1003 Malectin_like 6.6e-28 CL0202