Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0992 ATGAACACTTCCTCTTTTTCTCTTTTCATCTTTCTGTTTCTCCATCTTTTACTCTTGCCTCTCCACATTGCTTTTGCTAATGATGCCAGTTATAATCCCTTGGAAAACATTACCCTCAACTGTGGCACTTATTCATCAGAGCAAGTATCATATAATGAGAGGATCTGGACTGGTGATGCAGGTTCAGCGTATGTATCCTCTAATGATGCAGAAATCAACAAGTCCCTGATGGTCAAAGCCTCTGTGGGTAATGCATCTGTTCCTGATGTTCCATATATGACTGCTCGAGTATTTCACTCTCCATTTGCCTACAGATTCAATGTGACTCCAGGTTCCAAATTTGTCCGCCTCCACTTCTACCCAACTTCTTACTCGGGTCTGGATGTCTCCAAAGCTTTTGTATCAGTCACTGCTGGTAATTTCACTCTCATGCATAACTTCAGTGTTTCGCTCACGGCTGATTACCTCAACAAAGCATATCTAATGAAAGAGTTTATCATCCATGTGATTGGAATAACCTTGGAACTGACTTTCTCTCCATCATCCAGTGCCTCGGATGTCTATGCATTTGTCAACGGAATCGAAGTTGTTTCTATGCCTTCCAATCTCTATATTCAGGGTGATAATGCCCATATTCCTTTAGTTGGTCATGATCCTGTGCTATACTACATTCATAATGATTCTGCCTTGGAAACCATGTATAGAATCAATGTAGGAGGGGATGATATTCCAGCCAAATATGATACGGGGATGTTTCGCACTTGGACTGGAGATGATGGTCTTTTATTTTTTCCTCTAGCATCCACAGAACCCACTGATGTGGTCTCGCCAATTCTATATCCAGAAACTGCTCCAGCATATATTGCACCAGAACTTGTCTATCGCACAGCCCGAGCAATGATACCCTTTCCAGATGAACGTCTTAATTTAAACTATAATCTTTCATGGTTCTTCCCGATTGATTCTGGTTTCAATTACCTCATCAGGCTTCACTTTTGTAATATCTACCGAGACATAACTGTGCTGAATCAGATAGTTTTTACTATATATTTAAATAATCAAACAGCTAAGGATGAAGTAGATGTGATTGCTATGAGTGGTGGTCCTGGAATTCCTGTGTACCTAGACTTTGTAGTGATGGTTCCTGAAACTAGCGAGGGGAAGCAGGATCTTTGGGTCGATCTGTATCCAGACGTGCAGACTAAACCTCAGCAGTATACTGCTTTCTTGAATGGAGTAGAGATCTTCAAACTTAGCAATCGGGATGGAAATCTTGCAGGGGTCAACCCAATCAGCGGCAAGTTCGAGTCAGTTGTACCAGTACCCCATGTTGCAATATCAAAAAAACCAAAGAAAATCATATTTATCATCATTGGATGTGGACCAAGTCTTGTGGCACTAGGAGGATCAACTCTCTTTTTCGTGATTGTTTACGTGCTGAAATTAGTTGAGCCAAGGAAGATTTCATCATGGCTTCACCTCCTTATCCTTATTCGCAATAAAGTTAGAAAAGCTCACAAGTCATCTTTTCGCCATCGTAATTTCTCCATGGGTGAGATAAGAGTGGCAACAAATAACTTTGACGAGGCTCTGGTCATTGGCATAGGTGGGTTTGGCAAGGTTTACAAGGCCAGTTTTGATGGCGGGTCTACCTTTGTAGCCATAAAGCGGAGCACTCCAATGTCAGAACAAGGTGCTTTAGAATTTGAGACAGAGATCCATGTGCTCTCCCAGCTGCGCCACCACAACCTTGTTTCTCTTTTGAGTCATTGCCAAGAAGATGGAGAGATGATTCTGGTGTATGAATATTTGTCCAATGGAACTCTGTTTGACCATCTTCATTTGAGATCAAGGGAAGAACTCCCTTTGTCATGGATTCAACGTCTTGAGATATGCATTGGAGTTGCAAGGGGCATACACTACCTCCACACCGGCACAGAGCACAAGTTCATCCACCGAGACATCAAAACCAGCAATATACTCTTAGACCATAATTGGGTGGCCAAAGTTTCAGACTTTGGCTTGTCAAAGGCAAGCAACCCAGCCCTAGTCAGCACCAATGTCAAGGGCAGTGTTGGATACTTAGACCCAGAGTACTTTTGGCGACACAAGTTGACTGAGAAATCTGATGTGTACTCATTTGGGGTGGTGCTATTGGAGGTGCTGAGTGCAAGGCCTGCTGTGAATCCGGTTGAAGATGATGAGCATGGTAACTTGGCGGAATGGGCTCTGTACTGCTGTGAGAATGGCATTACAACTCAATTGGTAGACCCTGACCTTGAAGGAAAGATAGCAACAGAATCTTTTGAGACATATATTGAGGTGGCAAAGAAATGCTTGGCTGAGAAAGGGGTAGAGCGCCCCACCATGAGTGTTGTGTTGCAGAGACTTGTCTTGGCATTGCAGCTTCAGAGAAATGCTGATGATAACATAGCACCAACCAGAGATGGCAAGAGAACAGAAAATAACGATTTAGAGAGAAACTCAGATTTGACACCTGGGATTGAGTTCTCTGAGATCATGATACCCATTGGACGATGA 2541 0.4294 MNTSSFSLFIFLFLHLLLLPLHIAFANDASYNPLENITLNCGTYSSEQVSYNERIWTGDAGSAYVSSNDAEINKSLMVKASVGNASVPDVPYMTARVFHSPFAYRFNVTPGSKFVRLHFYPTSYSGLDVSKAFVSVTAGNFTLMHNFSVSLTADYLNKAYLMKEFIIHVIGITLELTFSPSSSASDVYAFVNGIEVVSMPSNLYIQGDNAHIPLVGHDPVLYYIHNDSALETMYRINVGGDDIPAKYDTGMFRTWTGDDGLLFFPLASTEPTDVVSPILYPETAPAYIAPELVYRTARAMIPFPDERLNLNYNLSWFFPIDSGFNYLIRLHFCNIYRDITVLNQIVFTIYLNNQTAKDEVDVIAMSGGPGIPVYLDFVVMVPETSEGKQDLWVDLYPDVQTKPQQYTAFLNGVEIFKLSNRDGNLAGVNPISGKFESVVPVPHVAISKKPKKIIFIIIGCGPSLVALGGSTLFFVIVYVLKLVEPRKISSWLHLLILIRNKVRKAHKSSFRHRNFSMGEIRVATNNFDEALVIGIGGFGKVYKASFDGGSTFVAIKRSTPMSEQGALEFETEIHVLSQLRHHNLVSLLSHCQEDGEMILVYEYLSNGTLFDHLHLRSREELPLSWIQRLEICIGVARGIHYLHTGTEHKFIHRDIKTSNILLDHNWVAKVSDFGLSKASNPALVSTNVKGSVGYLDPEYFWRHKLTEKSDVYSFGVVLLEVLSARPAVNPVEDDEHGNLAEWALYCCENGITTQLVDPDLEGKIATESFETYIEVAKKCLAEKGVERPTMSVVLQRLVLALQLQRNADDNIAPTRDGKRTENNDLERNSDLTPGIEFSEIMIPIGR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0992 846 Gene3D Transferase(Phosphotransferase) domain 1 604 820 - -
Acco12g0992 846 PANTHER OS03G0124300 PROTEIN-RELATED 9 473 IPR046957 GO:0004672
Acco12g0992 846 Pfam Protein kinase domain 532 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0992 846 Gene3D - 228 419 - -
Acco12g0992 846 Gene3D - 36 200 - -
Acco12g0992 846 MobiDBLite consensus disorder prediction 810 829 - -
Acco12g0992 846 FunFam FERONIA receptor-like kinase 36 200 - -
Acco12g0992 846 Pfam Malectin-like domain 39 417 IPR024788 -
Acco12g0992 846 FunFam Receptor-like protein kinase FERONIA 604 819 - -
Acco12g0992 846 MobiDBLite consensus disorder prediction 811 826 - -
Acco12g0992 846 FunFam FERONIA receptor-like kinase 228 419 - -
Acco12g0992 846 ProSitePatterns Protein kinases ATP-binding region signature. 533 556 IPR017441 GO:0005524
Acco12g0992 846 Gene3D Phosphorylase Kinase; domain 1 512 603 - -
Acco12g0992 846 ProSiteProfiles Protein kinase domain profile. 527 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0992 846 SMART serkin_6 527 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0992 846 SUPERFAMILY Protein kinase-like (PK-like) 510 795 IPR011009 -
Acco12g0992 846 CDD STKc_IRAK 533 797 - -
Acco12g0992 846 FunFam receptor-like protein kinase FERONIA 497 603 - -
Acco12g0992 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0992 Acco-ChrAcco12 10265840 10268380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0992 29 846 Receptor kinase-like Gene Family AT3G51550 47.285 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Acco12g0992 Malectin_like 4.8e-35 CL0202