Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0982 ATGGCGTCGCAAATGGCGATCATTGGTCGGACGCGTTATCTGATCAAAGCGCTTCAATCTAACTACGCTAGTACTTCCGTGAAAACTATTACCACCTTCCCTTCCCTCTCTCAGGAGCCTGAACTCGCCGAATCTCCGGCAACGGCCGCCCCAACCCCGCTTCCTCCCAACCCGGCCTCGGGTAGTCCTCTCTACAATGAGAATTGGCGCAGCCCAATTCCACCTTCTGCAACCCAGTCAGTGATTCCACTGGGGTTTCTTAATCTAGTCCCCGGTCATCGCATCCAAACAATGGCTCAGACATTTGATGTTAAGAGCTTGATGGATCAGTTTGCTAATTGGGTGGCCTCTCAGGAATGGGCTGCTATCAAAGAGTTGTTCGAGTCTTGGGTTAAGTCGTTGGACAAGAATGGGAAGCCGAATAAGCCTGATGTGAATTTGTATAATCATTACCTGAGAGCAAACTTGATGATTGGCTTTTCTGCTGGGGAGCTACTTGATTTGTTGGCTGGAATGGAGGATTTTGGTATCTCACCCAATACTGCTTCGTTCAATTTGGTGCTTAAAGCAATGTACCACGCCAAGGAGACTGAAGCTGCTCAGAAGTTACTGGAACGGATGCTGCTGACTGGAAATGAATCTCGCCCTGATAATGAATCATATGACTTGGTCATTGGAATGCTGTTTTTGACTGGCCAAATTGATGCTGCATTGAAATATATAGATTTGGCTTTGAAATCAAGTTATATGTTGTCAACGAATGTGTTCACAAACTGTGTAAATAGTTGTATCAAAATGGGTAGGCTAGATACTTTGGCAGCAATAATTGAAAAGTGCAAGACAATGGATCAGAACAAAGCTCTTTGCCCTCCATGGAATGTGTGCTACTTAATAGCTGAAACTGCAATGCATCAGGATAATAGCAAGCTAGCTTACTATGCCCTGGAGTTTATGGCTATGTGGATTGCAAGGGGTGAGAAGGCAAGACTGCCTGCCTCGCTTTCTGTAGATGAAGGTTTACTTGTGTCAGCACTAGCCACTGCAGGTAGGACCTATAGTTCTACTCTGCTAGATGCAGCATGGAGTATTTTGCGGCGTCAAAGAAAGGCTCCTATTCCTGAATCTTATCTCGCAAAGATAAATGCCCTTGCATCTATGGGGAACTTACAAAGGGCTTTTTCTACGCTACATGACTTTGAGGTTGCTTATGGAGACTCCAGTGAAGAAACTGAAGAGATGTTCTCTCCCTTTACTTCTTTACATCCATTGGTTGTGGCATGTTCCAAGAAGGGATTTGAGACATTGGATTCTGTCTATTTTCAACTGGAAAGTTTGAGCCAGGCAGAGAATCCTTATAAATCTGTTGCTGCTCTAAACTGCGTCATTTTAGGTTGTGCAAACATATGGGACATTGATCGTGCATACCAAACTTTTGAGGCAATTGGATTCTCTTTTGGATTGACACCTGATATTCATTCATATAATGCGCTGATGCATGCATTTGGGAAGCTCAAAAAGACACATGAAGCAACTAAGGTGTTTGAGCACGTAGTGAGCTTGGGTGTAAAGCCTAATGCATTGTCATATTCTCTGCTCGTGGATGCCCACCTCATGAACCGAAATGTCAAAGACGCTCTAACTGTAATTGATGATATGGTGGCTGCTGGATTTGAACCTACAAAAGAGACGCTAAAAAAGGTTCGAAGGCGATGCATGCGAGAGATGGACTATGACAGTGACGATAGAGTTCAGTCCATCGCCAAATCTCTGAACATTCGAATGGGTTCAGAAGCCCGTCGGGACATTCTATTCAATCTTAATTACAGCATGGATTTTTCTTAA 1842 0.4414 MASQMAIIGRTRYLIKALQSNYASTSVKTITTFPSLSQEPELAESPATAAPTPLPPNPASGSPLYNENWRSPIPPSATQSVIPLGFLNLVPGHRIQTMAQTFDVKSLMDQFANWVASQEWAAIKELFESWVKSLDKNGKPNKPDVNLYNHYLRANLMIGFSAGELLDLLAGMEDFGISPNTASFNLVLKAMYHAKETEAAQKLLERMLLTGNESRPDNESYDLVIGMLFLTGQIDAALKYIDLALKSSYMLSTNVFTNCVNSCIKMGRLDTLAAIIEKCKTMDQNKALCPPWNVCYLIAETAMHQDNSKLAYYALEFMAMWIARGEKARLPASLSVDEGLLVSALATAGRTYSSTLLDAAWSILRRQRKAPIPESYLAKINALASMGNLQRAFSTLHDFEVAYGDSSEETEEMFSPFTSLHPLVVACSKKGFETLDSVYFQLESLSQAENPYKSVAALNCVILGCANIWDIDRAYQTFEAIGFSFGLTPDIHSYNALMHAFGKLKKTHEATKVFEHVVSLGVKPNALSYSLLVDAHLMNRNVKDALTVIDDMVAAGFEPTKETLKKVRRRCMREMDYDSDDRVQSIAKSLNIRMGSEARRDILFNLNYSMDFS 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0982 613 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 525 559 IPR002885 -
Acco12g0982 613 NCBIfam pentatricopeptide repeat 492 526 IPR002885 -
Acco12g0982 613 NCBIfam pentatricopeptide repeat 528 560 IPR002885 -
Acco12g0982 613 Pfam PPR repeat family 489 535 IPR002885 -
Acco12g0982 613 Pfam Pentatricopeptide repeat domain 142 191 IPR002885 -
Acco12g0982 613 PANTHER OS07G0599000 PROTEIN 1 612 IPR044605 -
Acco12g0982 613 Gene3D Tetratricopeptide repeat domain 417 600 IPR011990 GO:0005515
Acco12g0982 613 Gene3D Tetratricopeptide repeat domain 110 310 IPR011990 GO:0005515
Acco12g0982 613 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 490 524 IPR002885 -
Acco12g0982 613 MobiDBLite consensus disorder prediction 37 70 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0982 487 579 Glycosyltransferase AT1G05670 27.957 4.70e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0982 12 10069886 10073469 Acco12g0982 12 10069886 10073469 ECH