Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0967 ATGGAGGAAAAGAAGTTCGTTTGCAAGTATTGCAACAAGAAGTACCCATGTGGGAAGTCTCTTGGTGGACACATTAAGACTCATATGACTGCTAAACATTATTCGTCGCTTCAATCTAAGGAAGGTAGAACCAATAATGCCGATGATAGTGTCGTGAAGTTCGATGGTGGAAGAAGGAAGAGGAAGAGAGATTTTGGGTCTGAAGAAGAAGAAGAAGAAGCTGCTTCTGAAAACCTCATTTATGGTCTTCGAGAGAATCCCAAGAAAACAACGAGGTTCGTACATTCCAAAGTTGTTAATGTTGCTGCTGCTGCACAACAACAACAGCAAGAGAGGTTCTGCAAAGAATGTGGGAAAGGCTTTTTGTCTCTGAAAGCTCTCTGTGGCCACATGGCTTGTCATTCAGAGAAAGATAAAGGGATGATGAACAATTCTGGGTTTAGCATGAAGCAGAAATTGGTGGTGGGTAGCCAATCGGACACAGAAACATCATCTTCTCCGAATCATCCTAGGAGATCCCGAAGAATGAGGTTCAAGACCGTGAATACTGATAAAAACGATCATCACCCTTCTTTTGTTTCTTTGGCGAATGGTTCTTCCTCAGTATCTGAGGTTGAGCAGGAACAAGAAGAGGTTGCTCGGTGGTTGATGTTATTATCTAAAGACACTAGCCATAAGGGTCGTTTTGTTTTGCCCACTGAATCTTCCGACAACAATTCTGTTGTGGTAGAGGCAAAATCACCGTCTATGGACACGATTATTACTTTAAAAAATGGTAAGAAAAGCTCTGTGCCTAATGGTTTTGAGATGGTGAAGGAGAAGAAGAAGAAGAAGAAGGTGGTGCAGTATAATAATGGCATTCAGTTGAAGAAGTCTGCTGAGATTGTCGATTCTGATGATTCAGATTCTGGGTATCTCAGAAATGGTCCCAAAAAGTTGGAATTTTCAATTGATGGGTATCCTAGGAATGGGGAATTCAAGACACCAAAAGTGGAACTCAGGTCTGGGTGTGATTTTGATCAGAGCTATGATGCTGAATTGAAGAAGAAGATGCTAATTAAGAACAGAGGAAGGACCAGAAACACTGAACCCAGAAAGCTAATTTTGGAGGATTTGGACTACAATACAATAACAGATGAATCGACAAGGGAAGAGTTAATCAATTGGAGAAAGAGGCCAAGATATGATGATTCTCTTTGCCAAAACAATTCAGTTGGTGTTTCTTGCAAAAGGACATCAAATGGTTTTCACAGTGAGCTGCCATTGAAGCCCCCAGAGAGCTTAAAGAGTGAACAAGTTATTATCAATGGCTCTCAGGATTCAGTAGATGAGAGTGATGAAAGCAGCACAGACACTGATGCTTATACTGCTCCGAGAACTCATAGCAGCTGCAAGGTCATCAATGGAGAGAAGGAAGGCAAGTTCAAGAAGAAATTGAAGTTAAAGAAAAGTAGGGACCATGAATGCCCAATCTGCTACAAAAATTTTAAGTCAGGCCAAGCACTAGGAGGTCACAAAAGGTCTCATTTTATTGGAGCTTCTGAAGAAGACAACACAGTAGTGGTGATCAAACAAGACGACCCTCCTATGGTTCCATGCTTGATTGATCTCAATCTACCTGCTCCAATTGATGATTAG 1638 0.4133 MEEKKFVCKYCNKKYPCGKSLGGHIKTHMTAKHYSSLQSKEGRTNNADDSVVKFDGGRRKRKRDFGSEEEEEEAASENLIYGLRENPKKTTRFVHSKVVNVAAAAQQQQQERFCKECGKGFLSLKALCGHMACHSEKDKGMMNNSGFSMKQKLVVGSQSDTETSSSPNHPRRSRRMRFKTVNTDKNDHHPSFVSLANGSSSVSEVEQEQEEVARWLMLLSKDTSHKGRFVLPTESSDNNSVVVEAKSPSMDTIITLKNGKKSSVPNGFEMVKEKKKKKKVVQYNNGIQLKKSAEIVDSDDSDSGYLRNGPKKLEFSIDGYPRNGEFKTPKVELRSGCDFDQSYDAELKKKMLIKNRGRTRNTEPRKLILEDLDYNTITDESTREELINWRKRPRYDDSLCQNNSVGVSCKRTSNGFHSELPLKPPESLKSEQVIINGSQDSVDESDESSTDTDAYTAPRTHSSCKVINGEKEGKFKKKLKLKKSRDHECPICYKNFKSGQALGGHKRSHFIGASEEDNTVVVIKQDDPPMVPCLIDLNLPAPIDD 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0967 545 ProSiteProfiles Zinc finger C2H2 type domain profile. 487 509 IPR013087 -
Acco12g0967 545 SUPERFAMILY beta-beta-alpha zinc fingers 113 509 IPR036236 -
Acco12g0967 545 SUPERFAMILY beta-beta-alpha zinc fingers 2 35 IPR036236 -
Acco12g0967 545 SMART c2h2final6 112 134 IPR013087 -
Acco12g0967 545 SMART c2h2final6 487 509 IPR013087 -
Acco12g0967 545 SMART c2h2final6 6 28 IPR013087 -
Acco12g0967 545 Pfam C2H2-type zinc finger 6 29 - -
Acco12g0967 545 Pfam C2H2-type zinc finger 487 509 - -
Acco12g0967 545 Pfam C2H2-type zinc finger 114 136 - -
Acco12g0967 545 ProSitePatterns Zinc finger C2H2 type domain signature. 489 509 IPR013087 -
Acco12g0967 545 MobiDBLite consensus disorder prediction 36 71 - -
Acco12g0967 545 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Acco12g0967 545 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 139 IPR013087 -
Acco12g0967 545 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 544 - -
Acco12g0967 545 MobiDBLite consensus disorder prediction 46 69 - -
Acco12g0967 545 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Acco12g0967 545 MobiDBLite consensus disorder prediction 154 201 - -
Acco12g0967 545 MobiDBLite consensus disorder prediction 438 459 - -
Acco12g0967 545 MobiDBLite consensus disorder prediction 187 201 - -
Acco12g0967 545 ProSitePatterns Zinc finger C2H2 type domain signature. 114 134 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0967 Acco-ChrAcco12 9859025 9860662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0967 1 545 C2H2 Transcription Factor Family AT1G26610 37.919 8.29e-84 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco12g0967 zf-C2H2_6 3.5e-10 CL0361