Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0964 ATGCATGTAAAAGAAGGAACCCTCAGTAACCTTCAATGTCCCGGTTCAAAATGTGCTGTTGTGATTCCCCCTGCTCTATTAAAACGCTTGCTTAATGATAAAGAGTACGAGCGCTGGGAATCCTTGATGTTGGAGAAAACAATTGAATCAATGTCTGATGTTGCTTATTGCCCAAGATGTGAAACACCTTGTATAGAAAATAAAGAACATGATGCTCAATGCTCTACATGCCTCTTTAGCTTTTGTACCCTTTGCAGGGACCGACGCCATGTTGGCATGCAATGCATGAACCTAGAGATCAAGCTTCAAATTTTGCAAGAGCGCCAGAATTCATCTCAGTTAAACGGAGCTCAGAAGCTGAAGGAACGTAAAATGATAAATGAAATGCTTAGCGTCAAAGAAATTCGTCGTGATTCTAAGCTGTGCCCTCCTTGTCAAATGGCTATTTCCCGAACTGAAGGTTGCAACAAAATGGTGTGTGGTAATTGTGGCGAATATTTCTGTTACCACTGCAACAAAGCACTTGCTAAATCTGATCCTTACGGACATTTCAGGTTGGAAACAATAACCACATGTTTTGCTGGGCATGCCAATGCCATTATTGCTACTCTTGCAAGCAGATTGTTAGGCGCAGCGCGCAGCATTATGGACCCAAGGGTTGCAAACAGCACTCCGATGATTAGTAAGGAGATCAATGGTTGTGTCCTGATGATGGAGATGAATGTTTGCCGACACTGTCAAAGTTTGAAGTGA 753 0.4263 MHVKEGTLSNLQCPGSKCAVVIPPALLKRLLNDKEYERWESLMLEKTIESMSDVAYCPRCETPCIENKEHDAQCSTCLFSFCTLCRDRRHVGMQCMNLEIKLQILQERQNSSQLNGAQKLKERKMINEMLSVKEIRRDSKLCPPCQMAISRTEGCNKMVCGNCGEYFCYHCNKALAKSDPYGHFRLETITTCFAGHANAIIATLASRLLGAARSIMDPRVANSTPMISKEINGCVLMMEMNVCRHCQSLK 250
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0964 250 SUPERFAMILY RING/U-box 2 51 - -
Acco12g0964 250 Gene3D - 115 198 - -
Acco12g0964 250 Pfam IBR domain, a half RING-finger domain 37 95 IPR002867 GO:0008270
Acco12g0964 250 Pfam IBR domain, a half RING-finger domain 132 174 IPR002867 GO:0008270
Acco12g0964 250 SUPERFAMILY RING/U-box 37 99 - -
Acco12g0964 250 SMART ibrneu5 118 192 IPR002867 GO:0008270
Acco12g0964 250 SMART ibrneu5 37 95 IPR002867 GO:0008270
Acco12g0964 250 SUPERFAMILY RING/U-box 127 184 - -
Acco12g0964 250 PANTHER UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED 6 176 - -
Acco12g0964 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 52 IPR013083 -
Acco12g0964 250 CDD BRcat_RBR_RNF14 48 99 - -
Acco12g0964 250 ProSiteProfiles TRIAD supradomain profile. 1 196 IPR044066 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco12g0964 Acco-ChrAcco12 9807280 9809891 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0964 3 217 ARIADNE family AT3G27710 25.112 3.02e-12 63.9