Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco12g0964 | ATGCATGTAAAAGAAGGAACCCTCAGTAACCTTCAATGTCCCGGTTCAAAATGTGCTGTTGTGATTCCCCCTGCTCTATTAAAACGCTTGCTTAATGATAAAGAGTACGAGCGCTGGGAATCCTTGATGTTGGAGAAAACAATTGAATCAATGTCTGATGTTGCTTATTGCCCAAGATGTGAAACACCTTGTATAGAAAATAAAGAACATGATGCTCAATGCTCTACATGCCTCTTTAGCTTTTGTACCCTTTGCAGGGACCGACGCCATGTTGGCATGCAATGCATGAACCTAGAGATCAAGCTTCAAATTTTGCAAGAGCGCCAGAATTCATCTCAGTTAAACGGAGCTCAGAAGCTGAAGGAACGTAAAATGATAAATGAAATGCTTAGCGTCAAAGAAATTCGTCGTGATTCTAAGCTGTGCCCTCCTTGTCAAATGGCTATTTCCCGAACTGAAGGTTGCAACAAAATGGTGTGTGGTAATTGTGGCGAATATTTCTGTTACCACTGCAACAAAGCACTTGCTAAATCTGATCCTTACGGACATTTCAGGTTGGAAACAATAACCACATGTTTTGCTGGGCATGCCAATGCCATTATTGCTACTCTTGCAAGCAGATTGTTAGGCGCAGCGCGCAGCATTATGGACCCAAGGGTTGCAAACAGCACTCCGATGATTAGTAAGGAGATCAATGGTTGTGTCCTGATGATGGAGATGAATGTTTGCCGACACTGTCAAAGTTTGAAGTGA | 753 | 0.4263 | MHVKEGTLSNLQCPGSKCAVVIPPALLKRLLNDKEYERWESLMLEKTIESMSDVAYCPRCETPCIENKEHDAQCSTCLFSFCTLCRDRRHVGMQCMNLEIKLQILQERQNSSQLNGAQKLKERKMINEMLSVKEIRRDSKLCPPCQMAISRTEGCNKMVCGNCGEYFCYHCNKALAKSDPYGHFRLETITTCFAGHANAIIATLASRLLGAARSIMDPRVANSTPMISKEINGCVLMMEMNVCRHCQSLK | 250 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco12g0964 | 250 | SUPERFAMILY | RING/U-box | 2 | 51 | - | - | |
Acco12g0964 | 250 | Gene3D | - | 115 | 198 | - | - | |
Acco12g0964 | 250 | Pfam | IBR domain, a half RING-finger domain | 37 | 95 | IPR002867 | GO:0008270 | |
Acco12g0964 | 250 | Pfam | IBR domain, a half RING-finger domain | 132 | 174 | IPR002867 | GO:0008270 | |
Acco12g0964 | 250 | SUPERFAMILY | RING/U-box | 37 | 99 | - | - | |
Acco12g0964 | 250 | SMART | ibrneu5 | 118 | 192 | IPR002867 | GO:0008270 | |
Acco12g0964 | 250 | SMART | ibrneu5 | 37 | 95 | IPR002867 | GO:0008270 | |
Acco12g0964 | 250 | SUPERFAMILY | RING/U-box | 127 | 184 | - | - | |
Acco12g0964 | 250 | PANTHER | UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED | 6 | 176 | - | - | |
Acco12g0964 | 250 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 52 | IPR013083 | - | |
Acco12g0964 | 250 | CDD | BRcat_RBR_RNF14 | 48 | 99 | - | - | |
Acco12g0964 | 250 | ProSiteProfiles | TRIAD supradomain profile. | 1 | 196 | IPR044066 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco12g0964 | Acco-ChrAcco12 | 9807280 | 9809891 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco12g0964 | 3 | 217 | ARIADNE family | AT3G27710 | 25.112 | 3.02e-12 | 63.9 |