Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0935 ATGCGTGGAACAGGTGACCAACTACCACCGTCATCGGAGCCTCCTCCGCCGCCAAGCACCTCCATGGACGCGCTTTTCAATGGTGTTTCCTCTGGCGGTGCCGGCTTTGGATTCAGCAGCCCCGGTCCTATGACTCTGGTTTCCAATTTCTTCAACGAGAACGACGACTTCAAGTCCTTCTCTCAACTTCTCGCCGGTGCTATGCCGCCGTCTCCATTGGTGACGGATGGTGGCGCCAGCAGCACTGGGCTTAAGCATCAGCCGCCGATGTTCATGGTTAGCCCCGCCAGCTACATCGGTGCCCCTAGACTTTTTCCGGCTTCTCAGGCGGCGCCGGTCAACGATCATACGTCGTCGTCAGCGGCGGCTTCCATGGCTAATCAAGTTGACATGACGAGGAGCTCAATTCCAGATTCCGGTACGACTACGTCAATGAAGGAATGTCCTAATGATGGATTCAACTGGCGCAAGTATGGGCAGAAACAGGTGAAAGGAAGTGAATTTCCTCGGAGTTATTACAAGTGCACGTATCCGGGCTGTGGCGTGAAGAAGAAGGTGGAGAGATCGGTCAACGATGACCATGTGGTGGCCATCATTTACAAAGGACAACATAATCATCAACCTCCTCGCCCTACGAACAAGGGCGCGACCTGGGACCAGTCATCAGCGGCAGAACATGAAGCAGAAGGATTGAGTGAGAGTGATGAGGAAGATGCTGAAGTGGAGGAGGATACAAATGAAGAGCCTGACCTAAAGAAGAAGAGAAATACACAAGATATGGTGGCGTCTGAGGGAGTGACTTCGCATAGAACAGCCATGGAGCCAAGGATCATTGTGCAGACAACAAGCGAAGTTGACCTGCTAGACGATGGGTATAGATGGCGAAAATATGGCCAAAAACTCGTTAAAGGCAGTCCTTTCCCTAGGAGTTACTACAAGTGCACAACCACAGGCTGCAATGTTCGGAAGCATGTTGAGAGGGCATCATCAGATCCAAAAGCTGTCATTACAACATATGAAGGAAAACACACTCACGAAGTGCCAGCAGCTAAAACTAACAGCCACACCTTCGCCAACAACTCTGCATCATCACAGCTTAGACCCCACAATTCCACAATACCAGACAGACACAATTTCAACCAGCAGCAGCAACATCAGCCTGTGGCACGTCTTAGGTTGAAGGAAGAACAGAGAACCTAG 1200 0.5108 MRGTGDQLPPSSEPPPPPSTSMDALFNGVSSGGAGFGFSSPGPMTLVSNFFNENDDFKSFSQLLAGAMPPSPLVTDGGASSTGLKHQPPMFMVSPASYIGAPRLFPASQAAPVNDHTSSSAAASMANQVDMTRSSIPDSGTTTSMKECPNDGFNWRKYGQKQVKGSEFPRSYYKCTYPGCGVKKKVERSVNDDHVVAIIYKGQHNHQPPRPTNKGATWDQSSAAEHEAEGLSESDEEDAEVEEDTNEEPDLKKKRNTQDMVASEGVTSHRTAMEPRIIVQTTSEVDLLDDGYRWRKYGQKLVKGSPFPRSYYKCTTTGCNVRKHVERASSDPKAVITTYEGKHTHEVPAAKTNSHTFANNSASSQLRPHNSTIPDRHNFNQQQQHQPVARLRLKEEQRT 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0935 399 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 119 378 IPR044810 GO:0003700
Acco12g0935 399 Gene3D WRKY domain 273 349 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco12g0935 399 Gene3D WRKY domain 137 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco12g0935 399 ProSiteProfiles WRKY domain profile. 283 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco12g0935 399 MobiDBLite consensus disorder prediction 350 388 - -
Acco12g0935 399 Pfam WRKY DNA -binding domain 289 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco12g0935 399 Pfam WRKY DNA -binding domain 150 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco12g0935 399 MobiDBLite consensus disorder prediction 206 220 - -
Acco12g0935 399 MobiDBLite consensus disorder prediction 201 274 - -
Acco12g0935 399 FunFam WRKY transcription factor 137 210 - -
Acco12g0935 399 SUPERFAMILY WRKY DNA-binding domain 147 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco12g0935 399 MobiDBLite consensus disorder prediction 350 399 - -
Acco12g0935 399 MobiDBLite consensus disorder prediction 230 245 - -
Acco12g0935 399 SUPERFAMILY WRKY DNA-binding domain 280 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco12g0935 399 FunFam WRKY transcription factor 33 275 341 - -
Acco12g0935 399 SMART WRKY_cls 288 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco12g0935 399 SMART WRKY_cls 149 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco12g0935 399 MobiDBLite consensus disorder prediction 1 28 - -
Acco12g0935 399 ProSiteProfiles WRKY domain profile. 144 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0935 Acco-ChrAcco12 9533171 9535843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0935 4 64 WRKY Transcription Factor Family AT2G03340 54.098 4.38e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco12g0935 WRKY 2.2e-25 CL0274