Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0929 ATGGAAGACACACAGGAGTCTAATGGCAAGAAGAGATTCACAGCCCAGAGAAGAAGGAGCTTAAGGGTAGGAGCAAACTCTGATGAGCATTATTATTATTATCAGAATCATCAGAATCAGTTTGGTGGGTTATTGTGTAACCAGAATAATAATAAGTATCAGAGGTATTGTCCTGCTCTTCTTCCTCCACCTTCTCTGTTACCTCTGCAACTAGCTTTAACTCTACCGTTTCCTCAAAACCAAACCTTCAAATCCAAAACACATTTCCAGAAATATCCATGCAAACTCAGTCACAATTCTCCTCCGTTGGCTGCTTCCTCAGATAACAACAACAAGCTATCAGAAGAATCCACAGTTTCTCCTGCTGAGGTGGGGCTTCTTCAACTTCAAACTAAAGGGAAGACATGCCTTAAAGGAGATGAAGGGAAGAAATTTATTCCTGCAAGAAAACCACAGACATTAATTGCTGCGAAAAGACCAGACTCTGGTGGCAAAGAAGGTTCTGTGATCTCTCTTCTCGCCAATCACTTCCTCGTGCAATTCGATCCATCTCAAAAGATATACCATTACAATGTTGAAATCACCCCAAATCCCTCCAAGGAAGTTGCCAGAGAAATCAAACAGAAATTGGTTAACAACAATTCTGTGGGTTTTTCTGGTGCTGTGCCTGCATATGATGGGAGGAAGAATCTTTACAGCTCAGTGGAATTCCAAAATGATAAGCTTGAGTTCTACATAAGCCTTCCAATCCACTCAACCAAGTCGTCGGCACTACCTTATGGAGAAATATATGAGTTGAAAGAGAAGAAAGAACAGATTAAACTGTTTAGGATAAATATCAAATTAGTTTCTAGGATCAATGGGAAGGAGTTGAGTAACTACTTGAGCAAAGAGGGAGATGATTGGGTCCCACTTCCACAGGATTATCTTCATGCTTTGGATGTAGTTTTGAGGGAAAACCCGACCGAGAAGTGTGTACCCGTAGGCAGATCATTTTACTCAAGTTCAATGGGAAAAACCAGGGAGATCGGAGGAGGAGCTGTTGGATTTAGAGGGTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTTGCCCTCAATGTAGATTTCTCTGTGACTGCTTTCCATGAGAGCATAGGAGTTATCCCATACTTGCAGAAGCGACTCGAGTTTCTTCGAGATCTTTCTCAAAGGAAGACAACAAGTTTAACTAGTGAAGAAAGGAAGGAAGTGGAGAAGGCATTGAAGAACATCAGGGTCTTTGTTTGCCACAGAGAAACCGTGCAGAGATACCGTGTCCATGGCTTAACCGAAGAAGCAACAGAAAATCTTTGGTTTGCCGATAGGGATGGAAAGAATTTAAGGCTTGTGACTTACTTCAAAGATCACTATAACTATGACATCCAGTTCAGAAAATTGCCATGCTTGCAAATTAGTAGGAGTAAACCATGTTATCTTCCTATGGAGCTTTGTCTGATCTGTGAAGGTCAGAAATTTCTTGGTAAGTTGTCTGATGATCAGACAGCAAAGATACTGAAAATGGGCTGCCAAAGACCAAGAGAACGAAAAGCCCTCATCGAAGGAGTCATGAGAGGGAATGTGGGTCCTACCAGTGGCAACCAGGAAGGAGAATTTAAACTCAAAGTGTCACGCGAAATGACAAGGCTAACCGGGAGGATTCTTCACCCTCCCAAGCTAAAGCTCGGAGACGGAGGTCGGGTAAGAAACATATTTCCTTCGCGCCATGACCGCCAGTGGAACTTTCTTGATGGACATGTCTTTGAAGGAACTAAAATTGAAAGATGGGCACTAATAAGTTTTGGTGGCACACCTGAGCAGAAGGCTAATATCCCTGGATTCATAAACCAGCTATCTCAAAGGTGTGAACAATTGGGAATTTTCCTCAACAAGAATACCATCATTAGTCCTCAGTTTGAATCAAGCCATGTGCTTAACAATGTTAACCTTTTGGAATCTAAGCTCAAGAAAATCCAGAGAGCCGCCTCAAACAATCTCCAACTTCTTATTTGCATTATGGAGAAAAAACACAAAGGTTACGCAGACCTGAAACGAATTGGAGAGACTAATGTTGGGGTTGTAAGCCAGTGTTGCTTGTATCCAAATCTCGTCAAGCTAAGTTCACAGTTTTTGGCTAATTTGGCCTTAAAAATCAATGCCAAAGTTGGTGGATGCACAGTTGCTCTTTACAATTCACTTCCTTCTCAAATTCCAAGACTGTTTCAGGTCGATGAGCCAGCCATTTTCATGGGTGCTGATGTAACACATCCTCATCCACTCGACGATTTCAATCCATCTATTGCCGCGGTTGTTGGCAGCATGAACTGGCCCACAGCGAACAAGTACGTCTCGAGAATAAGGTCTCAGAGACACAGACAAGAGATCATCCAGGATCTTGGTGCAATGGTGGGTGAGTTGCTTGATGATTTTTATCAGGAAGTAAAGAAACTTCCTGGGAGAATAATTTTCTTCAGAGATGGGGTTAGTGAAACACAGTTTTATAAAGTTCTTGAAGAGGAATTGCAATCCATCAGAGAGGCATGTTCCAAATTTCCTGACTACAAACCATTCATTACTTTCGCGGTAGTACAGAAGAGGCACCATACAAGGTTGTTTCCTGCTGAAACAGACCAATCCTCGCATCAAAACCATTTTTCATATGAGAATATTCCCCCGGGGACTGTGGTTGATTCCGTGATCAGTCACCCGAAAGAATTTGATTTCTATCTGTGCAGCCATTGGGGCGTGAAAGGAACAAGCAGACCAACTCATTACCATGTTCTGTGGGATGAAAACCAGTTCACTTCTGATGAACTACAGAAGCTGGTTTACAACTTATGTTACACTTTTGTGAGGTGCACCAAGCCAATTTCTTTGGTCCCACCTGCTTATTATGCACATTTGGCAGCTTACAGAGGCAGACTTTACCTAGAGAGGTCATCAGAGTCTTCGGGTTTATACAGAAGTTCATCTACACTATCAAGAGCTGCCCCTCCAAAGACAGTACCTCTTCCAAGACTCAGTGAAAACATCAAGAAGCTCATGTTCTTCTGCTAA 3075 0.4237 MEDTQESNGKKRFTAQRRRSLRVGANSDEHYYYYQNHQNQFGGLLCNQNNNKYQRYCPALLPPPSLLPLQLALTLPFPQNQTFKSKTHFQKYPCKLSHNSPPLAASSDNNNKLSEESTVSPAEVGLLQLQTKGKTCLKGDEGKKFIPARKPQTLIAAKRPDSGGKEGSVISLLANHFLVQFDPSQKIYHYNVEITPNPSKEVAREIKQKLVNNNSVGFSGAVPAYDGRKNLYSSVEFQNDKLEFYISLPIHSTKSSALPYGEIYELKEKKEQIKLFRINIKLVSRINGKELSNYLSKEGDDWVPLPQDYLHALDVVLRENPTEKCVPVGRSFYSSSMGKTREIGGGAVGFRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTSLTSEERKEVEKALKNIRVFVCHRETVQRYRVHGLTEEATENLWFADRDGKNLRLVTYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCLICEGQKFLGKLSDDQTAKILKMGCQRPRERKALIEGVMRGNVGPTSGNQEGEFKLKVSREMTRLTGRILHPPKLKLGDGGRVRNIFPSRHDRQWNFLDGHVFEGTKIERWALISFGGTPEQKANIPGFINQLSQRCEQLGIFLNKNTIISPQFESSHVLNNVNLLESKLKKIQRAASNNLQLLICIMEKKHKGYADLKRIGETNVGVVSQCCLYPNLVKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFQVDEPAIFMGADVTHPHPLDDFNPSIAAVVGSMNWPTANKYVSRIRSQRHRQEIIQDLGAMVGELLDDFYQEVKKLPGRIIFFRDGVSETQFYKVLEEELQSIREACSKFPDYKPFITFAVVQKRHHTRLFPAETDQSSHQNHFSYENIPPGTVVDSVISHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSSESSGLYRSSSTLSRAAPPKTVPLPRLSENIKKLMFFC 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0929 1024 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 152 985 - -
Acco12g0929 1024 Pfam Argonaute linker 1 domain 327 376 IPR014811 -
Acco12g0929 1024 Gene3D - 746 1024 IPR036397 GO:0003676
Acco12g0929 1024 Pfam PAZ domain 389 511 IPR003100 GO:0005515
Acco12g0929 1024 SMART PAZ_2_a_3 386 526 IPR003100 GO:0005515
Acco12g0929 1024 MobiDBLite consensus disorder prediction 1 20 - -
Acco12g0929 1024 ProSiteProfiles Piwi domain profile. 674 984 IPR003165 GO:0003676
Acco12g0929 1024 ProSiteProfiles PAZ domain profile. 386 495 IPR003100 GO:0005515
Acco12g0929 1024 Gene3D paz domain 372 499 - -
Acco12g0929 1024 Pfam Piwi domain 675 981 IPR003165 GO:0003676
Acco12g0929 1024 FunFam Protein argonaute 7 373 499 - -
Acco12g0929 1024 SMART Piwi_a_2 674 984 IPR003165 GO:0003676
Acco12g0929 1024 CDD Piwi_ago-like 544 983 IPR045246 -
Acco12g0929 1024 Gene3D - 560 736 - -
Acco12g0929 1024 SMART DUF1785_2 326 378 IPR014811 -
Acco12g0929 1024 SUPERFAMILY Ribonuclease H-like 659 984 IPR012337 -
Acco12g0929 1024 CDD PAZ_argonaute_like 389 494 - -
Acco12g0929 1024 FunFam protein argonaute 10-like 742 1024 - -
Acco12g0929 1024 FunFam Argonaute 10 560 736 - -
Acco12g0929 1024 Pfam N-terminal domain of argonaute 170 317 IPR032474 -
Acco12g0929 1024 SUPERFAMILY PAZ domain 373 531 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0929 Acco-ChrAcco12 9483620 9487419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0929 95 1024 Eukaryotic Initiation Factors Gene Family AT1G48410 40.538 0.0 643