Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0926 ATGAGCTCCGACGCGTCCACTGGTGGCGGCGGTTCTTCCAGCGGCTCTTCATCGGCGGCGGGCATGGACAAGAAGAGGGAGAAGGCTAAAGTGAGTCGCACTTCAATGATACTATGGCATTCACATCAAAACGACGCCACCGCTGTTCGGAAGCTTCTGGAGGAAGATCCGTCGCTTGTGATGGCCAGAGACTACGATAATCGAACTCCACTTCATGTGGCTTCCCTCCATGGTTGGATTGACGTTGCTAAGAGCTTGATTGAATTTGGCGCCGATGTTAACGCTCAGGATCGTTGGAGAAACACTCCTCTAGCTGATGCTGAAGGGGCTAAAAAGTATAGCATGATGGAGCTCTTAAAATCACATGGAGGCTTGTCTTATGGCCAAAGAGGAAGCCACACTGAACAGAATTCAGTTGCACCCCCATTGCCTAACAAGTGTGATTGGGAAGTCGACCCTACTGAGCTGGACTTCTCACAATTAGTTCGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGGACACCAGTTGCCGTCAAACGCATTCTTCCATCTCTTTCAGATGATAAATTAGTGGTCCAGGACTTCAGGCATGAGGTTGGTTTGTTATTGAAGCTTCGACACCCAAATGTAGTCCAGTTTCTTGGAGCTGTTACCGAGAAGAAACCTCTTATGCTAATTACTGAATACCTTAGAGGGGGCGATCTTCATCATCATCTTAAGGAAAAAGGTTCAATTAGTCCATCAACTGCTGTCAGCTTTGCTTTAGATATTGCCAGAGGGATGGCCTATCTTCATAACGAACCAAACGTTATAATCCATCGAGACCTTAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGCGCAGAGCATTTAAAAGTTGGAGATTTTGGACTGAGCAAGCTCATCAAGGTCCAGAGTTCTCATGACGTTTACAAGATGACGGGTGAAACTGGAAGCTACCGGTATATGGCTCCTGAAGTATTCAAACACAAGAAATACGATAAGAAAGTTGATGTCTTCTCTTTTGCAATGATACTATATGAGATGCTCGAAGGTGAACCACCTTTTGCGAATTTTGAGCCTTATGATGGAGCCAAACATGTGGCTGAAGGACACAGACCAACTATGAAGGCAAAGGGTTATATCCCTGAACTGCGAGAGTTAACAGAACGGTGCTGGGCAGCTGATTCCCATCAAAGACCTTCCTTCTTGGAGATCCTTAGACGACTTGAGAAGATCAAAGAAAACCATCTACCTTCAGATCATTCCTGGAAATTGTTCTCCTAA 1305 0.4536 MSSDASTGGGGSSSGSSSAAGMDKKREKAKVSRTSMILWHSHQNDATAVRKLLEEDPSLVMARDYDNRTPLHVASLHGWIDVAKSLIEFGADVNAQDRWRNTPLADAEGAKKYSMMELLKSHGGLSYGQRGSHTEQNSVAPPLPNKCDWEVDPTELDFSQLVRIGKGSFGEILKAHWRGTPVAVKRILPSLSDDKLVVQDFRHEVGLLLKLRHPNVVQFLGAVTEKKPLMLITEYLRGGDLHHHLKEKGSISPSTAVSFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSAEHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHKKYDKKVDVFSFAMILYEMLEGEPPFANFEPYDGAKHVAEGHRPTMKAKGYIPELRELTERCWAADSHQRPSFLEILRRLEKIKENHLPSDHSWKLFS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0926 434 FunFam serine/threonine-protein kinase STY46-like 151 237 - -
Acco12g0926 434 MobiDBLite consensus disorder prediction 1 20 - -
Acco12g0926 434 Pfam Protein tyrosine and serine/threonine kinase 163 416 IPR001245 GO:0004672|GO:0006468
Acco12g0926 434 SMART ANK_2a 66 95 IPR002110 GO:0005515
Acco12g0926 434 MobiDBLite consensus disorder prediction 1 33 - -
Acco12g0926 434 ProSiteProfiles Protein kinase domain profile. 158 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0926 434 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
Acco12g0926 434 FunFam Integrin-linked protein kinase family 237 433 - -
Acco12g0926 434 Gene3D Transferase(Phosphotransferase) domain 1 238 431 - -
Acco12g0926 434 CDD STKc_MAP3K-like 164 416 - -
Acco12g0926 434 SMART serkin_6 158 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0926 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Acco12g0926 434 Gene3D Phosphorylase Kinase; domain 1 144 237 - -
Acco12g0926 434 PIRSF ILK 1 434 - -
Acco12g0926 434 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 58 421 - -
Acco12g0926 434 SUPERFAMILY Ankyrin repeat 35 123 IPR036770 -
Acco12g0926 434 Gene3D - 23 134 IPR036770 -
Acco12g0926 434 Pfam Ankyrin repeats (many copies) 52 104 IPR002110 GO:0005515
Acco12g0926 434 ProSitePatterns Protein kinases ATP-binding region signature. 164 185 IPR017441 GO:0005524
Acco12g0926 434 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Acco12g0926 434 SUPERFAMILY Protein kinase-like (PK-like) 157 422 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0926 Acco-ChrAcco12 9449044 9454016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0926 1 434 MAP Kinase Kinase Kinase AT1G14000 78.458 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Acco12g0926 PK_Tyr_Ser-Thr 4.2e-63 CL0016