Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0915 ATGGTGAAGTCTTCGTCGTGCTGCGAGGAACAAGTAGGGTTAAAGAAAGGACCATGGACTCCTGAGGAAGACGAGAAGCTCATGTCTTACATTCAACTACTCGGCCGTGGAAACTGGTCTTCCTTGCCTGCCAAAGCTGGACTAAGGAGATGTGGTAAGAGCTGTAGGCTGAGATGGATTAATTATCTAAGACCTGACATCAAACGAGGCAACTTTAGCTTACACGAAGATCAAACCATTATACAACTTCATGCTCTCCTTGGAAACAGATGGTCGGTCATTGCACATCACTTGCCAAAAAGAACAGACAACGAGATCAAGAATCACTGGAACATCCACCTCAAGAAGAGGCTCATTAGAATGGGCATCAACCCCAACACCCACAAGCCCTTAAACGATGCAGCCAACCTCAGCCACATGGCTCAGTGGGAGACTGCTCGGCTCGAAGCCGAAGCCAGGCGAGTCAAAGAATACTCCAAGCTGCATCTCCAGAACCAGCTCGGCTCCTCCTCCTCCTCTTCTCAGCCTTCACTAACTCGGCTTGTCCTCATCAAGATCACACCTCGCCCATCGCCACCAGCGTGCCTCGACGTCCTTAAGGTATGGCAGAATTCATGGTCGTCCACGTCAGCAGATCATAGCACCCCCAAAATGCATAGCATGTACGCCATGATGCTCGCCACTGACGACCTTGAGTCGCCGGCGCCAACGTTGAGCTTCCTAGATAACGTCCCTAGCAACTCCAATTATCCTAATAGTAACTTTTGGTTGATGAATAAAACTTCGCTTTCTTCCAACACCACCACCACCACCACCGTCAGTAAAGACAATGGAATCATGGAAGGAGCTAGAGACGATGAACCATTTGGAAACAAAGAGCAAAGTAGCGGAGACGACGGTATTATGGCGGCCATGGGACCATTATTTCCCAGTGTTAGGCAATATTATGAAGGTAATGAGATGTCACCACAACAAAACTTGGGAGTGTCATCAAGTGCTGGGGATGACTGGGAAGCCATTCTTGACCTGGTCAATGGTTGGCCCCAATCAACGGCTTTCCCTGTGGTGTGA 1071 0.4921 MVKSSSCCEEQVGLKKGPWTPEEDEKLMSYIQLLGRGNWSSLPAKAGLRRCGKSCRLRWINYLRPDIKRGNFSLHEDQTIIQLHALLGNRWSVIAHHLPKRTDNEIKNHWNIHLKKRLIRMGINPNTHKPLNDAANLSHMAQWETARLEAEARRVKEYSKLHLQNQLGSSSSSSQPSLTRLVLIKITPRPSPPACLDVLKVWQNSWSSTSADHSTPKMHSMYAMMLATDDLESPAPTLSFLDNVPSNSNYPNSNFWLMNKTSLSSNTTTTTTVSKDNGIMEGARDDEPFGNKEQSSGDDGIMAAMGPLFPSVRQYYEGNEMSPQQNLGVSSSAGDDWEAILDLVNGWPQSTAFPVV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0915 356 FunFam MYB transcription factor 70 131 - -
Acco12g0915 356 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Acco12g0915 356 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Acco12g0915 356 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 253 - -
Acco12g0915 356 SMART sant 15 65 IPR001005 -
Acco12g0915 356 SMART sant 68 116 IPR001005 -
Acco12g0915 356 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Acco12g0915 356 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Acco12g0915 356 MobiDBLite consensus disorder prediction 266 298 - -
Acco12g0915 356 CDD SANT 71 114 IPR001005 -
Acco12g0915 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Acco12g0915 356 CDD SANT 18 63 IPR001005 -
Acco12g0915 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 63 IPR017930 -
Acco12g0915 356 Gene3D - 15 68 - -
Acco12g0915 356 Gene3D - 71 141 - -
Acco12g0915 356 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Acco12g0915 356 FunFam MYB-related transcription factor 15 68 - -
Acco12g0915 356 MobiDBLite consensus disorder prediction 279 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0915 Acco-ChrAcco12 9287260 9288634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0915 5 176 MYB Transcription Factor Family AT5G15310 67.760 1.32e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco12g0915 Myb_DNA-binding 1.2e-14 CL0123