Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0914 ATGGAGAAAGACCTCCCTCCTGGCTTCAGGTTTCATCCCACTGATGAAGAGCTCATCGTCTTCTACCTTCTTAACCAGTACAGATCAAAGCCATGTCCTGCTTCTATCATCCCAGAAGTTGATATCTATAAATTCAATCCTTGGGACTTGCCTGAGAAAGCAGAGTGTGAAGAGAAGGAAAGGTATTTCTTTAGCCCACGAGATAGAAAGTACCCTAATGGAATGAGACCGAACAGAGCCACTGAGTCTGGCTACTGGAAGGCGACTGGTACAGACAAGGCTATATATAGTAGTGGGTCCAAGCTTATTGGGTTGAAGAAAGCTCTGGTTTTCTACAAAGGGAAGCCAACAAAAGGGATCAAGACTGGTTGGATTATGCATGAGTACAGACTCGTTGAATCCAGAACATCACAAGCCAACAAACATGTTGGGACCATGAGATTGGATGACTGGGTTCTGTGCAGGATCTATAAGAAGAAGAATATGGTGGGGAAGACAATAATGGAGGAGAAACAGGAATTTCCCAGTAGTAGTACTGAGAACGGTAATGAAACATTTACAGCAAATAATTATCATCAGAATGAGCAAGCAATGATGAAGCTTCTTCTTCCAAGGACTTTTGATAATTATCTGGGATCATCAGTTTCACAGATATTTTCCGATGGACGCTATAATTATTCCACCGATGATCTTCAAAATCAAGCTTCGACGACCAATTCTGAAATAGTGGACTCCTCCTTTGTCAAACCTAGTTTATTTCAAGACCATAATTATTATTCAGGGAAGTTTCAAGTGATGAAACAAAGTAGCACCATGGACAGCAACCCACAGCCAATGTTTATGAGCCAAGTGTATGATCTGTGA 864 0.4155 MEKDLPPGFRFHPTDEELIVFYLLNQYRSKPCPASIIPEVDIYKFNPWDLPEKAECEEKERYFFSPRDRKYPNGMRPNRATESGYWKATGTDKAIYSSGSKLIGLKKALVFYKGKPTKGIKTGWIMHEYRLVESRTSQANKHVGTMRLDDWVLCRIYKKKNMVGKTIMEEKQEFPSSSTENGNETFTANNYHQNEQAMMKLLLPRTFDNYLGSSVSQIFSDGRYNYSTDDLQNQASTTNSEIVDSSFVKPSLFQDHNYYSGKFQVMKQSSTMDSNPQPMFMSQVYDL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0914 287 Gene3D NAC domain 14 164 IPR036093 GO:0003677|GO:0006355
Acco12g0914 287 ProSiteProfiles NAC domain profile. 5 159 IPR003441 GO:0003677|GO:0006355
Acco12g0914 287 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 232 - -
Acco12g0914 287 Pfam No apical meristem (NAM) protein 6 131 IPR003441 GO:0003677|GO:0006355
Acco12g0914 287 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0914 Acco-ChrAcco12 9247565 9249086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0914 5 263 NAC Transcription Factor Family AT1G69490 53.160 1.69e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco12g0914 NAM 1.1e-37 No_clan