Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0892 ATGGCTTCTGAATCCAATGTTTCTGAGAATTCGTCCCTCTTTGAAAGTTTGTTCAGATTCAGAGAGCCCTCTGTTTTCTTACCCTTCATCTTAGGCTTCTCCACCGATTCTTCTTTAAGACAAGACAATCAAAACCCAAATCAGGAAACCACAAATTCAGAAAATAGTATTAATACCCATGGCGAGAGAGAAAGAGTGGTCTTGATCAACCCCTTTACGCAGGGTATGGTGGTGATTGACGGTACTTCGAACCTCGAGACTCTGTTCCAAGAAATTGGCATGAAAAATGGGCATCCGCCGGCATCGAAGGAGTCTATAGAGGCGATGCCGAGCGTAGAAATTGGAGAAGGAGAAGGCGCCAGCGGCGACGAGTGTGTGATTTGTTTGGAGGAATGGGAGGTTGGTGGGGTGGCAAAAGAGATGCCTTGTAAGCACAAGTTTCATCAGAATTGCATAGAGAAGTGGTTGGGAATTCATGGGTCTTGCCCTGTTTGTAGATACCAGATGCCTGTGGCTGAGAAAGAAGCATGCAAGAGAGATGAAGAAGAAGAACCAGAAGCAGAAGGAGGAGAGAGGAGGAGGGTTGGCAGAGAAATTTGGGTGAGCTTCAACTTTAGAAGTGAGAATTCAAACCAAGCTCCTTCTGATAATTCTAGTGATGCTTCATCAAGTCCAAGAGGTGATTCTGAGGTAGAGAATTAG 702 0.453 MASESNVSENSSLFESLFRFREPSVFLPFILGFSTDSSLRQDNQNPNQETTNSENSINTHGERERVVLINPFTQGMVVIDGTSNLETLFQEIGMKNGHPPASKESIEAMPSVEIGEGEGASGDECVICLEEWEVGGVAKEMPCKHKFHQNCIEKWLGIHGSCPVCRYQMPVAEKEACKRDEEEEPEAEGGERRRVGREIWVSFNFRSENSNQAPSDNSSDASSSPRGDSEVEN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0892 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 172 IPR013083 -
Acco12g0892 233 SUPERFAMILY RING/U-box 106 171 - -
Acco12g0892 233 MobiDBLite consensus disorder prediction 38 62 - -
Acco12g0892 233 Pfam Ring finger domain 123 166 IPR001841 -
Acco12g0892 233 MobiDBLite consensus disorder prediction 206 226 - -
Acco12g0892 233 SMART ring_2 125 165 IPR001841 -
Acco12g0892 233 FunFam E3 ubiquitin-protein ligase RNF181 89 172 - -
Acco12g0892 233 MobiDBLite consensus disorder prediction 175 194 - -
Acco12g0892 233 MobiDBLite consensus disorder prediction 206 233 - -
Acco12g0892 233 MobiDBLite consensus disorder prediction 38 57 - -
Acco12g0892 233 ProSiteProfiles Zinc finger RING-type profile. 125 166 IPR001841 -
Acco12g0892 233 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 41 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0892 Acco-ChrAcco12 8909718 8910419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0892 1 205 C3H Transcription Factor Family AT1G26800 46.190 6.91e-57 178