Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0889 ATGAAGGCAGCTTGGAGGAACTGTCTGGTATATTCTTCAAAAGAACGCTCCAACAGTGCTCTTACCTCTTGTGATCTCTCGTCTTCTTCGATGGGGACGGTTTATGCAGACATGGGTTCCCTTTCTCTTTCTTCTTCTTCTGAAATGGGAAATAACAACAACAATATTGGGGGAACCAGCTGGCCTACTTTTCCCTTTATTACTAGGGATCATCATCTTCTTCTTCCCCACAACAACACTACCGATAATGACAACGATATTGGTTTGGAGTGTAAAGCTTCTGATCAATCTAGTACTGATCAGGACAATCTGATCATAGATCACACCCAAGAAAACCCTAATGAGAATTCTTCTGGTGTTTGCACTGGAAAAGTGGAAGCTGATTCTGGGCAGTCCAAGCTTTGTGCACGAGGCCATTGGAGACCTGCTGAAGACGCCAAGCTTAAAGAGCTCGTCGCACTCTATGGCCCTCAGAACTGGAACCTCATTGCAGAGAAATTAGAAGGAAGATCAGGTAAGAGTTGTAGGCTGAGGTGGTTTAACCAGTTGGATCCAAGGATAAACCGGAGGGCGTTTACTGAGGAGGAAGAAGATAGGCTAATGCAGGCACATAGGATATATGGGAACAAATGGGCCATGATTGCTAGATTATTCCCAGGAAGAACTGATAATGCAGTGAAGAATCACTGGCATGTTATAATGGCCAGGAAGTACAGAGAACAATCTAGTGCTTACAGAAGGAGAAGGTTAAGTCAACCTGCTAGTTACACAAGATCATCAATGGAGGACCAAAATTCAAGCTCAGTAACAGAACAACCGCCACCGCCTCCTCCACCTTATTGTCTTGTCCCCAACAATAACAACATAATGGCTAGTTTACCCTATGGTCACTTCCATGGAGCTAACGGTGGGGTTGAATATGGCTTCAATGATGTTCTTTCACCCCACATGGCTGGTGCATTACATGCATTCTCGAGCAGCAGCAAGCAGGCCCCTCATATTCATCACACCGCCTTTTACCCTCATCCTCCATCTTTTGATGTCATCTCTGGTGTTAGAGGCCATGACATGATATGTAAGGAAAACAGGACAAGTGATTATGAACTTCATAACTCTCTTAATGGATTCTTCTATCCTCATCAAGAAGATAATTTCAACCCATATTTGATGCCAATAATGCAGCAGCAGCAGCAACCACCACAGTCAAACTCGAACATTATAAATCCCACTTTTTACAGCTTATCATCATCAAATTCCATGGCTCATGTTTCCTCCGGCGAACCATCGTCGTCAGAGAACAGAGATAAAGTACTTACTCATCCATCTCCTCCTCCATTTATCGACTTTCTCGGAGTTGGAGCCACATAA 1368 0.4393 MKAAWRNCLVYSSKERSNSALTSCDLSSSSMGTVYADMGSLSLSSSSEMGNNNNNIGGTSWPTFPFITRDHHLLLPHNNTTDNDNDIGLECKASDQSSTDQDNLIIDHTQENPNENSSGVCTGKVEADSGQSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEDRLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLSQPASYTRSSMEDQNSSSVTEQPPPPPPPYCLVPNNNNIMASLPYGHFHGANGGVEYGFNDVLSPHMAGALHAFSSSSKQAPHIHHTAFYPHPPSFDVISGVRGHDMICKENRTSDYELHNSLNGFFYPHQEDNFNPYLMPIMQQQQQPPQSNSNIINPTFYSLSSSNSMAHVSSGEPSSSENRDKVLTHPSPPPFIDFLGVGAT 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0889 455 ProSiteProfiles Myb-like domain profile. 137 183 IPR001005 -
Acco12g0889 455 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 183 IPR017930 -
Acco12g0889 455 MobiDBLite consensus disorder prediction 247 269 - -
Acco12g0889 455 FunFam MYB transcription factor 137 188 - -
Acco12g0889 455 SUPERFAMILY Homeodomain-like 137 230 IPR009057 -
Acco12g0889 455 ProSiteProfiles Myb-like domain profile. 184 234 IPR001005 -
Acco12g0889 455 SMART sant 188 236 IPR001005 -
Acco12g0889 455 SMART sant 136 185 IPR001005 -
Acco12g0889 455 FunFam MYB transcription factor 190 261 - -
Acco12g0889 455 MobiDBLite consensus disorder prediction 244 282 - -
Acco12g0889 455 CDD SANT 140 181 IPR001005 -
Acco12g0889 455 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 184 238 IPR017930 -
Acco12g0889 455 Pfam Myb-like DNA-binding domain 189 232 IPR001005 -
Acco12g0889 455 Pfam Myb-like DNA-binding domain 137 183 IPR001005 -
Acco12g0889 455 CDD SANT 191 231 IPR001005 -
Acco12g0889 455 Gene3D - 190 265 - -
Acco12g0889 455 Gene3D - 137 188 - -
Acco12g0889 455 PANTHER MYB PROTEIN-RELATED 122 273 - -
Acco12g0889 455 MobiDBLite consensus disorder prediction 418 447 - -
Acco12g0889 455 MobiDBLite consensus disorder prediction 418 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0889 Acco-ChrAcco12 8844156 8845878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0889 112 249 MYB Transcription Factor Family AT1G69560 78.322 3.04e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco12g0889 Myb_DNA-binding 1.7e-14 CL0123