Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0882 ATGGAGGAGAGGAAGTTCGTGTGCAAGTATTGCAACAAGAAGTACCCGTGTGGGAAGTCTCTGGGTGGACACATCAGAACTCATATGGCTAATAAATTTAAGACCAATGTCGGTGATAGTGTTGTCAAGTTCGATGGTGGAAGGAAGAGGAAGAGAGATTTTGGTTCTGATGAAGAAGAAGAAACTGCTTCTGAAAACCCCATTTATGATCTCAAAGAGAATCCCAAGAAGACAACGAAGAAGAAGAAGAAGATCGTAATAATTCCCAAAGCTTCTTCTATACAAAAAGAAAGATTCTGCAAAGAATGTGGGAAAGGCTTTTTGTCTCTCAAAGCTCTCTGCGGCCACATGGCTTGTCACTCGGAGAAAGATAAAGGGACGATGAAGAAAAAGTTCGAGAACAATTCTGGGTTTGGCGTGAAGCAGAAAATGGTATTGATGATGGATAGCGAATCGGATACAGAGACATTATCTGCTCCGAGTTATCCTAGGAGATCCAGAAGTATGAGGTTCAAGACAGTGAATACTGATACAAATGGTTCTTCCTCTGTGTCTGATGTGGAGCAAGAACAAGAAGAGGTCGCTAAGTGTTTGATGTTATTGTCCAAAGACACGAGAATCATTTTCAAAAATGGTAGAAGAAGTGTTATGTCTAGTGGTGTTGAGATCGTGGAGGAGGAGAAGGTGGTGCTGTATAAGAACAAGAAGTTGAAGTCTGGTGAGATTGTTGATTCTGATAATTCAGATTCTGGGTTTTTCAGAAATGGTCCCAAAATGTTAAATTTGGATGTTCCAATTGATAAGCATCTCAGGAATAGGGAATTCAAAACACCAAAAGTGGAAGACAGGTCTGAATATAGGAACAAGGTACTGATCAAGAACAGAGGAAGAACAAGAATCTCTGAACCCCAAAAACTAACTTTGGAGGATTTGGATTATGATACAACAGATGGATTCACCAGGGAAGAGCTCATCAATTGGAGAAAGAAACCAAGCTATAATTCTCTCTTCCAAAACAATCCAATTGGTGTTTCTTGCAAGAAGACACCAAATGGTTTTCACACTGAGGGATCATGGAAGCAAGAGAGCCTAAACAGTGAAAAAGTTATCATCAGTGGCTCTTATGATGATGATGATGATTCATCAGCATATGATGAGAGTGATGAAAGTAGCACAGACACTGATGCTTATCCTGCTCAGACATCTAACAGAGTCAATGCAAAGAAGATCAGCAAGTGCAAGAAGAAATTGGAGTCAAAGAAAAGCAGGGACCATAGATGCCCCATCTGCTACAAACTTTTTAAGTCAGGTCAAGCGTTAGGAGGTCACAAAAGGTCTCATTTTGTTGGAGGTTCTGAAGAGAACACACTGGTGATCAAACAAGATTCTCCTGTTGTTCAATGCCTGATTGATCTCAATCTACCTGCTCCAGTTGATGATTAG 1443 0.4047 MEERKFVCKYCNKKYPCGKSLGGHIRTHMANKFKTNVGDSVVKFDGGRKRKRDFGSDEEEETASENPIYDLKENPKKTTKKKKKIVIIPKASSIQKERFCKECGKGFLSLKALCGHMACHSEKDKGTMKKKFENNSGFGVKQKMVLMMDSESDTETLSAPSYPRRSRSMRFKTVNTDTNGSSSVSDVEQEQEEVAKCLMLLSKDTRIIFKNGRRSVMSSGVEIVEEEKVVLYKNKKLKSGEIVDSDNSDSGFFRNGPKMLNLDVPIDKHLRNREFKTPKVEDRSEYRNKVLIKNRGRTRISEPQKLTLEDLDYDTTDGFTREELINWRKKPSYNSLFQNNPIGVSCKKTPNGFHTEGSWKQESLNSEKVIISGSYDDDDDSSAYDESDESSTDTDAYPAQTSNRVNAKKISKCKKKLESKKSRDHRCPICYKLFKSGQALGGHKRSHFVGGSEENTLVIKQDSPVVQCLIDLNLPAPVDD 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0882 480 SMART c2h2final6 425 447 IPR013087 -
Acco12g0882 480 SMART c2h2final6 6 28 IPR013087 -
Acco12g0882 480 SMART c2h2final6 98 120 IPR013087 -
Acco12g0882 480 MobiDBLite consensus disorder prediction 372 401 - -
Acco12g0882 480 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Acco12g0882 480 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 479 - -
Acco12g0882 480 SUPERFAMILY beta-beta-alpha zinc fingers 4 120 IPR036236 -
Acco12g0882 480 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Acco12g0882 480 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Acco12g0882 480 ProSiteProfiles Zinc finger C2H2 type domain profile. 425 447 IPR013087 -
Acco12g0882 480 MobiDBLite consensus disorder prediction 48 75 - -
Acco12g0882 480 Pfam C2H2-type zinc finger 425 447 - -
Acco12g0882 480 Pfam C2H2-type zinc finger 6 30 - -
Acco12g0882 480 Pfam C2H2-type zinc finger 100 122 - -
Acco12g0882 480 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 125 IPR013087 -
Acco12g0882 480 MobiDBLite consensus disorder prediction 378 392 - -
Acco12g0882 480 ProSitePatterns Zinc finger C2H2 type domain signature. 427 447 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0882 Acco-ChrAcco12 8723749 8725191 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0882 1 480 C2H2 Transcription Factor Family AT1G26610 36.381 9.31e-74 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco12g0882 zf-C2H2_6 1.2e-05 CL0361