Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0858 ATGATCATGGAGGAGGCAGATCATTCTAATGGGATCCGTAGACCCAATTTCCCACTTCAGCTTTTGGAGAAGAAAAATGGTGATCAACAGAGACACGATGATGGTGGTGGTGACCCGACCCGACCCAATAGTAACATCCAGCTTGCCGACCAATCCAAGAAGCCGCTTCCAAAGCGGGCGTCCACCAAGGATAGGCACACGAAAGTGGAAGGTCGGGGTCGTCGGATCCGTATGCCGGCGGCTTGTGCTGCCAGAGTTTTTCAGCTGACCAAGGAGCTCGGGCATAAGTCCGACGGCGAGACCATCGAGTGGCTGCTCCAACAGGCCGAACCCGCCGTAATCGCCGCCACGGGGACTGGGACCATTCCCGCAAATTTCACTTCGCTTAACATCTCCCTACGCAGCTCCGGCTCCACCGTGTCGGCGCCGTCACAATACTTTAGGGGTAATAGTTATAGTAACTACTTCAGTCCCAGCTTGTTCTCTTCATCGTTGCAGTTGAGAAACACGGTGGCGGCGGATGATTCTAGAAGAATCTTGTTTCCCGAGAATTCTTCGATGAATAATAATTTCAGTTCTGCGAGCAATGTGAATGCCATGTTACAACTATCAAAACAAGAGATGAGAGAAGAATCTGGCGGCGGCGGCCTTGAATCGACGGCAACGACAGAAACCGAAGGAAGTTTAGTGAAAAAGAGACGGTCATCACCAGAACAGGATCAGGAACTACCACAGAATAATAATCAGATGGGCAGTTATTTGTTACAATCCAGCACAGGCTCAATTCCGGCAAGTCATTCATCGGTTCCGGCGTCGTTTTGGATGGTAAGTAATAGCCCCGCCGGAAACAACCAATCCATAGGAAGCAGTGGCGGCGGTGGCAACAGCAACGGCAACAACGGCGGAAGCAGTAGTGGCGGCGGCGATCCGATATGGGCAATTCCTTCTGTTGGTAATTACAGTAACATGTATAGAGGAGCCATGTCTAGCAGTGGGATTCATTTCATGAATTTTGGTTCTCCAATGGCTCTTATGGGTGGAGCTCAATTAGGAGGTACAGTGATGAATGAAAGCAACTTAGGCATGCTCGCAGCCTTAAATGCGTACAGGCAGATTCCGGTGAGCAGCGTCTCAGAGTCTCCGGCGATCACTGGACACGGAGGAGGAGGAGGAGGTGAGCAATAA 1185 0.5097 MIMEEADHSNGIRRPNFPLQLLEKKNGDQQRHDDGGGDPTRPNSNIQLADQSKKPLPKRASTKDRHTKVEGRGRRIRMPAACAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSQYFRGNSYSNYFSPSLFSSSLQLRNTVAADDSRRILFPENSSMNNNFSSASNVNAMLQLSKQEMREESGGGGLESTATTETEGSLVKKRRSSPEQDQELPQNNNQMGSYLLQSSTGSIPASHSSVPASFWMVSNSPAGNNQSIGSSGGGGNSNGNNGGSSSGGGDPIWAIPSVGNYSNMYRGAMSSSGIHFMNFGSPMALMGGAQLGGTVMNESNLGMLAALNAYRQIPVSSVSESPAITGHGGGGGGEQ 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0858 394 ProSiteProfiles TCP domain profile. 62 116 IPR017887 -
Acco12g0858 394 MobiDBLite consensus disorder prediction 240 261 - -
Acco12g0858 394 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 40 384 IPR005333 GO:0003700
Acco12g0858 394 MobiDBLite consensus disorder prediction 1 75 - -
Acco12g0858 394 MobiDBLite consensus disorder prediction 206 261 - -
Acco12g0858 394 MobiDBLite consensus disorder prediction 284 307 - -
Acco12g0858 394 Pfam TCP family transcription factor 61 242 IPR017887 -
Acco12g0858 394 MobiDBLite consensus disorder prediction 56 75 - -
Acco12g0858 394 MobiDBLite consensus disorder prediction 284 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0858 Acco-ChrAcco12 8452977 8454161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0858 52 357 TCP Transcription Factor Family AT3G47620 43.953 3.31e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Acco12g0858 TCP 6.4e-39 No_clan