Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0846 ATGGCTCTCTTTCCAGCAAATTTCATATTACAGAACTCTCACCAAGAAGATCACCACCATCAACTTCCACCGTCTCTCAACTCAATTCTGCCTCAAGATTATCATGGAGGAACTTCACTTTTAGGGAAGAGATCTATGACATTTTCAGGACTTGAACTTGGAGGAGGAGGAGAAGAAGCAAACAATGGTTGTGAAGAAGACTTGTCTGATGATGGATCTCAGGCAGGGGAGAAGAAGAGAAGGCTTAACATGGAACAAGTGAAGACACTTGAGAAAAGCTTTGAACTTGGCAACAAGCTTGAGCCTGAGAGAAAAATGCAGCTGGCTAGAGCTCTTGGCTTGCAGCCAAGGCAGATTGCTATATGGTTTCAGAACAGAAGAGCAAGATGGAAGACAAAGCAGTTAGAGAAAGACTATGATCTTCTCAAAAGACAATATGAAGCTGTCAAGGCAGATAATGATGCCCTTCAAGCTCAAAACCAACAACTTCAGGCTGAGATATTGGCACTGAAAAGCAGAGAAGTACCAACTGAATCTATAAACCTGAATAAGGAAACAGAGGGATCATGTAGCAATAGGAGTGAGAATAGCTCAGATATTAAGTTGGATATCTCAAGAACACCCGCTATAGACAGTCCTTTATCGACTCATCATCATCAAATTACAAGCAGACCCTTGTTCCCATCATCAACAACAACAAATTCTAATTCTGCTGCTGCTAGGCCTTCTTCAGGAGGAGTGGCTCAGCTTTTTCAAACATCTTCAAGACCAGACCTTCATCAGAAGAATCATATTGATCATATGGTCAAAGAAGAGAGCTTGAGCAACATGTTTTGTGGGATTGATGATCAAACAGGGTTCTGGCCTTGGTTGGAGTAG 879 0.4198 MALFPANFILQNSHQEDHHHQLPPSLNSILPQDYHGGTSLLGKRSMTFSGLELGGGGEEANNGCEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADNDALQAQNQQLQAEILALKSREVPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHHHQITSRPLFPSSTTTNSNSAAARPSSGGVAQLFQTSSRPDLHQKNHIDHMVKEESLSNMFCGIDDQTGFWPWLE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0846 292 FunFam Homeobox-leucine zipper protein ATHB-13 70 137 - -
Acco12g0846 292 ProSitePatterns 'Homeobox' domain signature. 108 131 IPR017970 GO:0000981|GO:0006355
Acco12g0846 292 SUPERFAMILY Homeodomain-like 72 135 IPR009057 -
Acco12g0846 292 ProSiteProfiles 'Homeobox' domain profile. 73 133 IPR001356 GO:0003677
Acco12g0846 292 Coils Coil 125 173 - -
Acco12g0846 292 CDD homeodomain 78 134 IPR001356 GO:0003677
Acco12g0846 292 MobiDBLite consensus disorder prediction 52 79 - -
Acco12g0846 292 Gene3D - 70 139 - -
Acco12g0846 292 SMART HOX_1 76 137 IPR001356 GO:0003677
Acco12g0846 292 MobiDBLite consensus disorder prediction 179 247 - -
Acco12g0846 292 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 59 216 IPR045224 GO:0003700
Acco12g0846 292 Pfam Homeodomain 78 131 IPR001356 GO:0003677
Acco12g0846 292 PRINTS Lambda-repressor HTH signature 113 129 IPR000047 GO:0003677
Acco12g0846 292 PRINTS Lambda-repressor HTH signature 104 113 IPR000047 GO:0003677
Acco12g0846 292 Pfam Homeobox associated leucine zipper 133 173 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0846 Acco-ChrAcco12 8301287 8302913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0846 1 292 Homeobox Transcription Factor Family AT1G69780 61.258 3.86e-111 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco12g0846 Homeodomain 1.5e-15 CL0123