Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0833 ATGCAGCAAAGAGTAAAGACAAAACTTTTCTCCAAAGCTCAAACTCTGCTCTCACCTGCATCGTCATTAGTGTGCAATGGAAGCTTAGGGTTCCGCTGCGTCATTTTTAGGTCGTGCTTCGCTCTAGCTTCTACTTCTCCGAGTCGTTTTACACCCCAGCTTGGCTTAAGCGGGTCTGACACCCAAAACTCAGTTTCTGAAACTCTGGTCTCTGCCGACATGGGAAAGACTCCTGGAAAATGGATCAAGGCCCTCCTTTCGGGGAAGAAATCAAAGTCTCATTCATCAAAAAAGAAAGATTCCTTTAAAACTTTGAGTGCCAAGGACTTGCTGGCAGTGTCCTCTGAAATACATGTGTCTGATCCAATTGTGGATTCAGCACTGATATCCCAACTCACTTCTGGAGCTACTGCAACTAAGGAATCACTTTCTGAAAAGGGCTTGATCAGTGAGTTGCCAAATGACAGGGTTGTTATCTCAAATAGAGATGAAGAGACCAGTGCACAAGCTGTTGGTTTTGGTTCGCAGGATGGTACTGAGAAAATCAGGCTTAACCAAGCTGCTATAAAAGCTCAGGCTGCTATTAGGGGCTATCAGGCTCGGCGGTCATTTCAATCACTCAAAGGTATCATACAGCTGCAAGCCCTTATTCGTGGCAGCTTGGTCAGGAAACAAGCAATTGCTACTTTATACTGTGTGAAAGGAATAATTAAGCTTCAAGCGTTGGTTCGTGGTTACAAGGTCAGGCGTTCTGATATTGGTCTTCAAGTGCATAAAATTTGCAGGGGTACTGAATGTTTGATTGCTGTTGGAGCATCAACATCTACGCAGACAGAAAAGCTGTCCAAAAGTATCTTGGTTAACAAGCTTCTGGCTTCATCATCCTCTGTCTCTCCTCTATGTATCAACTATGATCCTGAACAACGTAACTGGGCTTCAGACTGGCTTGACCGGTGGACAAATTATCACTTTTGGGCGCCTCTTCTGGGTCTGGGGTTAAAAACAACAATTGACTCGGTTTCTGATGAGAAAAATTACAACAGTCAAACAGTTAAAAAGAAGGACGGCCAAGCTAAAAGTAATGCCCGGAAAAGTTCTGGTGTAAAAGTTAACAATGGTTCAGCTTCAGATTCAAACAAAAATAAACACTGTCCAAAAAAGGTTTCAGCTCACCCATTGCATTCAGGCCAAGAAAATACACAGAAGGAAGTTGATAAAAGTAATTTAAGAAAACCACTCAAGCAGCATGTTTCTGATAGACCTGAGATTGTCGATGGGAAAGGAAAAGACATACCGAGAAAAGCATTTGGTCATACTGTCACTGATGTTTCAGAGAATGGACCACATGTTTCTGGAGAAAAAATTAAAGATTCAACTGTGTCAAAATCCAAACAGCCTGATCATGATCAAAGCCCTGTACAACAACCAGAAGATGAACATGATTCTCCCATAGCTAACTTGCCATCTGGATTGAAGAACGGTAAAGGCGATGGTATTCAAAGAGTCAGTGAGGACTTGACTTGCATTACCAGTGTGAGCCCTAAGAATTGCCAGAGAAGAGCTTCACTGCCTGCCAAGTTTGACAGTCAAGATGACGGCGTGCAAAAAACTCTGAGACTGCCCAGCTATATGGCCCCTACTGAATCTGCAAAGGCTAGGGTAAAAGGACAAGGCTCCCCTAGGCTTGTTGCTGAGTTGGTAGATAAAACTGCCAGGCGGCATTCACTTTCATCTTCAGTCAATAGTAAGTTAGGTTCATTTTCTCCACGGACAGAAAGACCAGGAGCTTTGAGCAGTAAGGGAGTAATAAGAACTGATAGATCTCTGTCATCTTCAAGGGATGGGAGTGAGAAGTTGATCCAACCTCAGTGGAAAAGGTGA 1881 0.4338 MQQRVKTKLFSKAQTLLSPASSLVCNGSLGFRCVIFRSCFALASTSPSRFTPQLGLSGSDTQNSVSETLVSADMGKTPGKWIKALLSGKKSKSHSSKKKDSFKTLSAKDLLAVSSEIHVSDPIVDSALISQLTSGATATKESLSEKGLISELPNDRVVISNRDEETSAQAVGFGSQDGTEKIRLNQAAIKAQAAIRGYQARRSFQSLKGIIQLQALIRGSLVRKQAIATLYCVKGIIKLQALVRGYKVRRSDIGLQVHKICRGTECLIAVGASTSTQTEKLSKSILVNKLLASSSSVSPLCINYDPEQRNWASDWLDRWTNYHFWAPLLGLGLKTTIDSVSDEKNYNSQTVKKKDGQAKSNARKSSGVKVNNGSASDSNKNKHCPKKVSAHPLHSGQENTQKEVDKSNLRKPLKQHVSDRPEIVDGKGKDIPRKAFGHTVTDVSENGPHVSGEKIKDSTVSKSKQPDHDQSPVQQPEDEHDSPIANLPSGLKNGKGDGIQRVSEDLTCITSVSPKNCQRRASLPAKFDSQDDGVQKTLRLPSYMAPTESAKARVKGQGSPRLVAELVDKTARRHSLSSSVNSKLGSFSPRTERPGALSSKGVIRTDRSLSSSRDGSEKLIQPQWKR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0833 626 MobiDBLite consensus disorder prediction 504 518 - -
Acco12g0833 626 MobiDBLite consensus disorder prediction 449 464 - -
Acco12g0833 626 MobiDBLite consensus disorder prediction 398 436 - -
Acco12g0833 626 MobiDBLite consensus disorder prediction 573 588 - -
Acco12g0833 626 MobiDBLite consensus disorder prediction 342 379 - -
Acco12g0833 626 MobiDBLite consensus disorder prediction 342 534 - -
Acco12g0833 626 Pfam IQ calmodulin-binding motif 186 205 IPR000048 GO:0005515
Acco12g0833 626 Pfam IQ calmodulin-binding motif 208 225 IPR000048 GO:0005515
Acco12g0833 626 Pfam IQ calmodulin-binding motif 234 250 IPR000048 GO:0005515
Acco12g0833 626 SMART iq_5 207 227 IPR000048 GO:0005515
Acco12g0833 626 SMART iq_5 183 205 IPR000048 GO:0005515
Acco12g0833 626 SMART iq_5 231 253 IPR000048 GO:0005515
Acco12g0833 626 Pfam Protein of unknown function (DUF4005) 514 600 IPR025064 -
Acco12g0833 626 ProSiteProfiles IQ motif profile. 184 212 IPR000048 GO:0005515
Acco12g0833 626 ProSiteProfiles IQ motif profile. 208 235 IPR000048 GO:0005515
Acco12g0833 626 PANTHER IQ-DOMAIN 5-RELATED 74 581 - -
Acco12g0833 626 MobiDBLite consensus disorder prediction 603 618 - -
Acco12g0833 626 MobiDBLite consensus disorder prediction 570 626 - -
Acco12g0833 626 ProSiteProfiles IQ motif profile. 234 259 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0833 Acco-ChrAcco12 7972784 7978828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0833 74 626 IQD Protein Family AT1G14380 35.050 2.48e-77 255