LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco12g0832	ATGAAGGTTTTCTGGGTTTCGTTCTTCCCGTACCTTCTTTCTGCAATTTTTCTTATTCTTCTGCTTACTCACAATTCAACTGCACAGTTAACACCAAGTGAGAGTAGAATTCTGTTCCAAGTTCAGAAAATTCTTGAATATCCTCAGGTTCTTCAAGGATGGAACAACTGGACTAATTTCTGTTATCTTCCTTATTCACCTTCTCTCCAGATTGTCTGCTCTAACAGTCATGTAACAGAATTAACAATCATTGGAAACAAAACCTCTCTTTCTGAAAGATTTTCCATTGATTCTTTCTTCACTGTCTTGACAAAGCTTTCAAATTTGAATGTGCTTTCTTTAGTGTCCTTGGGTTTGTGGGGTCCTTTACCAGTCAAGCTTAACAGGTTCAGGTCTCTTCAAGTTCTGAACTTGACCTCAAATTTCATTCATGGTGAGATCCCGCCATCAGTCTCTTCCATTCAAAGTCTCAAAAGTCTGGTTTTGGCTGGGAATTTGTTCAATGGAACTGTCCCAGATCTTGAAAGATTAACTTTCCTCGAAGAACTCAATCTGGGAAACAACAAACTAGGTCCTGAGTTCTCTTCATTACCCAATAATCTTGTTACTTTAGTATTGAGAAACAATTCTCTGAGGTCTAAATTTCCTTCCAAGTTCAATCAGTTTAACAAGCTTCAGAAACTTGATATTTCTTCCAATGAAGTATCTGGAAACATCCCATCTTCTCTGTTCTCTCTGCCTTCAATTCAGTATGTGAACTTTGCAGACAACAAACTAAGTGGTTCCCTTTCAATGAACATTAGATGTGGTTCTTCTCTGACCTTTGTGGATATCTCAAACAATCTTTTGGTGGGAGAATTGCCTTCCTGTATTGGGTCAACCTCAAAATATTCAAATCACAAGGTTTTGTATTCTGGGAATTGTTTATCCATAAGAGGCTCCAAAGATCAACACCAAACTTCATATTGCAAGAAAGAGGAAGCTTTAGCCGCTGAGCCTCTTGAAGGAAGCCAGAAAAAGTCAGATATGAGTTTAGGCTTGGTACTTGGTATAATTGGAGGGTCTGTAGGAATTTCAATGCTTTTAGCTCTGATCATTCTTCTCGTCTTGAGGAAGACCAAAACAGAGAGAGCTGATAATAATTACCTAGACAGATCTGTTGCTGATAAATCCCACGCTCATGCATCCCCAAGGCCAAATACTGATACAAGACGAGTTCCTCAGACTACGAGGTTGCCAGCGATTGGACTTCAACCATACAGAATCTTCACATTAGAGGAAATAGAGGAGGCAACAAACAATTTTGACCCATCAAATCTGAGAGGAGAAGGAACAGAGGGACAGCAATATAAAGGATGGATCAGAGATGGGTCTGTGGTCCTAATCAACTGTGTAAAGCTAATGCACAAGAATGTGACCCAAAACCACATTGAGGTACTCTCTAATTTGAGGCACAGGCATTTGGTAAGTGTTGTTGGACACTGCTTAGTAGCTTCTCAGGACCATCGTCAGACAACAAGCACAATCTTTCTTGTTTATGAACAATTCTCAAATGGGTCATTGAGGGATCATTTAACAGATTGGAGGAAGAAGGAAGTGCTGAAATGGCCACAAAGAATGGCGATTACCATAGGAATTGCAAGGGGAATCCAGTTCTTACATACAGGGGTTGTTCCTGGTATATTTGGCAATAACATTAAGATTGAGAAAATGCTTTTGGATGATAGTCTCAATGCAAAAGTTAGTGGATATAACATTCCATTTTTATTCAATCATATTGACAGCACCGACAACAATGCAGAAAAGGAAGATATATACCAGTTTGGTGTTATTCTATTGGAAGTAATCACTGGCAAATCAATTTCTTCTGTCAATGAAGTAGAAGAGCTGAAAGATGAGCTGGAGAGAAGTTTATCAGAAGCAGCATCAGTACTTAGAGGAGTGACTGATCCCTCAATCAGGGGAAGTTATGCGTACGAATCCATGAGAACCACAATTCAGATTACCATAAGTTGCCTCAGTAAAGTTCCTAGTACACGCCCTTCAATGGAAGATGTTCTCTGGAATTTGCAGTATTCATTTCAGGTCCAAGAGAACTGGACCAGCAGTGGAAATCTCGGACTTGGTACCAGATTTTAG	2139	0.3955	MKVFWVSFFPYLLSAIFLILLLTHNSTAQLTPSESRILFQVQKILEYPQVLQGWNNWTNFCYLPYSPSLQIVCSNSHVTELTIIGNKTSLSERFSIDSFFTVLTKLSNLNVLSLVSLGLWGPLPVKLNRFRSLQVLNLTSNFIHGEIPPSVSSIQSLKSLVLAGNLFNGTVPDLERLTFLEELNLGNNKLGPEFSSLPNNLVTLVLRNNSLRSKFPSKFNQFNKLQKLDISSNEVSGNIPSSLFSLPSIQYVNFADNKLSGSLSMNIRCGSSLTFVDISNNLLVGELPSCIGSTSKYSNHKVLYSGNCLSIRGSKDQHQTSYCKKEEALAAEPLEGSQKKSDMSLGLVLGIIGGSVGISMLLALIILLVLRKTKTERADNNYLDRSVADKSHAHASPRPNTDTRRVPQTTRLPAIGLQPYRIFTLEEIEEATNNFDPSNLRGEGTEGQQYKGWIRDGSVVLINCVKLMHKNVTQNHIEVLSNLRHRHLVSVVGHCLVASQDHRQTTSTIFLVYEQFSNGSLRDHLTDWRKKEVLKWPQRMAITIGIARGIQFLHTGVVPGIFGNNIKIEKMLLDDSLNAKVSGYNIPFLFNHIDSTDNNAEKEDIYQFGVILLEVITGKSISSVNEVEELKDELERSLSEAASVLRGVTDPSIRGSYAYESMRTTIQITISCLSKVPSTRPSMEDVLWNLQYSFQVQENWTSSGNLGLGTRF	712

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco12g0832	712	Coils	Coil	624	644	-	-
	Acco12g0832	712	Gene3D	Transferase(Phosphotransferase) domain 1	516	597	-	-
	Acco12g0832	712	Pfam	Leucine rich repeat	200	259	IPR001611	GO:0005515
	Acco12g0832	712	Gene3D	Phosphorylase Kinase; domain 1	407	514	-	-
	Acco12g0832	712	ProSiteProfiles	Protein kinase domain profile.	435	695	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco12g0832	712	Gene3D	Ribonuclease Inhibitor	31	336	IPR032675	-
	Acco12g0832	712	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At2g02780	31	199	-	-
	Acco12g0832	712	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	194	691	-	-
	Acco12g0832	712	SUPERFAMILY	L domain-like	44	295	-	-
	Acco12g0832	712	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	201	328	-	-
	Acco12g0832	712	MobiDBLite	consensus disorder prediction	381	407	-	-
	Acco12g0832	712	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	516	705	-	-
	Acco12g0832	712	Gene3D	Transferase(Phosphotransferase) domain 1	598	703	-	-
	Acco12g0832	712	SUPERFAMILY	Protein kinase-like (PK-like)	413	690	IPR011009	-
	Acco12g0832	712	MobiDBLite	consensus disorder prediction	381	399	-	-
	Acco12g0832	712	Pfam	Protein tyrosine and serine/threonine kinase	442	555	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco12g0832	Acco-ChrAcco12	7962759	7965763	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco12g0832	26	623	Miscellaneous Gene Families	AT2G02780	48.336	2.04e-177	521

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Acco12g0832		PK_Tyr_Ser-Thr	6.1e-09	CL0016