Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0826 ATGAAGCAATCTATTATAAATATGGAAGACATAACAAGAAGTTGTTATCCCATTCAAAAACAAGACAAGCCTCCATGTATAGTTGTCTTGCCTAACATCTTTGAAGCTTTAAACAGTAAGTGGGAAATGGAAGGAGCTTCTTTGAAATGTGAACAGAGCCAAACAAGCCATAGGTCTTACATGGTGGATGGTGGTGAGAGTGATGCTGGTAAGTGTGGCAAAAGGAGGCGTAGAGATTCTTCTTTGGCCATCTTAGAAGTCAATGAACAGTCGCAAGAACAGAAGCCACAGGCTGACCGATCAACCACCACCACCACCGTGAAGAGAAGCTCGAGGTTTCGGGGAGTTAGCAGACATAGGTGGACAGGAAGGTTTGAAGCTCACCTATGGGATAAAGGAACATGGAATCCAACTCAGAAAAAGAAAGGGAAGCAAGGGGCTTATACTGAAGAAGAAGCAGCTGCTAGAGCTTATGATTTAGCTGCACTCAAGTACTGGGGAACTTCAACTTTCATAAATTTCTCTGTGTCTGAGTATGAGAAAGAGATTGAGATCATGAAAACTGTAACCAAAGAAGAATACCTTGGTTCATTAAGAAGGAGAAGTAGTGGTTTTTCTAGAGGTGTGTCAAGGTACAGAGGAGTAGCAAGGCACCATCACAATGGCAGATGGGAAGCAAGGATTGGGAGAGTATTTGGCAACAAGTACCTCTACCTTGGGACTTACAGTACACAAGAAGAGGCTGCTCGCGCATATGACATCGCAGCGATTGAGTACAGAGGCATAAATGCAGTGACTAATTTTGACTTGAGCACATACATCAGATGGTTAAGACCTGGATCATCTTCTTCCTCTTCTTTACTAGTGGGAAAGCCAAGCACGGATCCTCAGATCATGACAACCTCAAACCTTGTCCCCACAGATGGAACAACTGAGACAGCCAATTTAATCCTCCATCCATTCCCAGCTGGTGATTCTGACAGTACAAAGAAGCAAGCAAGTTCACAATACATGAGCTCTCTAGTTTCCTTAAAAAACAAGTCATCTTCCCCGACAGCATTGGGGATTCTCCTGAAATCATCAGTTTTTAGAGAGCTGATGCAGAAGAATCTGAATTCTGCTAATGAAGAAGCAGAAGAAAGTGAATTGAAGATCCCACAACAAGAAAGCAGTGATGGGTTTGGAGTGGCTTTTGATCATGAAGTTGCAAGTACCTCTTTCTTTTGCCCTTCCAATAGTTGCAGATTTTGCGTGGAGTCACTAGAAGAAAGCACATGCCCATTGTATCATAGAACCAGGCAATCCCTATGGAGTGGTGCTTTAAACTGA 1329 0.4304 MKQSIINMEDITRSCYPIQKQDKPPCIVVLPNIFEALNSKWEMEGASLKCEQSQTSHRSYMVDGGESDAGKCGKRRRRDSSLAILEVNEQSQEQKPQADRSTTTTTVKRSSRFRGVSRHRWTGRFEAHLWDKGTWNPTQKKKGKQGAYTEEEAAARAYDLAALKYWGTSTFINFSVSEYEKEIEIMKTVTKEEYLGSLRRRSSGFSRGVSRYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGSSSSSSLLVGKPSTDPQIMTTSNLVPTDGTTETANLILHPFPAGDSDSTKKQASSQYMSSLVSLKNKSSSPTALGILLKSSVFRELMQKNLNSANEEAEESELKIPQQESSDGFGVAFDHEVASTSFFCPSNSCRFCVESLEESTCPLYHRTRQSLWSGALN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0826 442 FunFam AP2-like ethylene-responsive transcription factor 210 271 - -
Acco12g0826 442 SUPERFAMILY DNA-binding domain 210 271 IPR016177 GO:0003677
Acco12g0826 442 MobiDBLite consensus disorder prediction 88 111 - -
Acco12g0826 442 Gene3D AP2/ERF domain 210 271 IPR036955 GO:0003700|GO:0006355
Acco12g0826 442 Gene3D AP2/ERF domain 111 177 IPR036955 GO:0003700|GO:0006355
Acco12g0826 442 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 87 336 - -
Acco12g0826 442 SUPERFAMILY DNA-binding domain 111 177 IPR016177 GO:0003677
Acco12g0826 442 MobiDBLite consensus disorder prediction 88 113 - -
Acco12g0826 442 Coils Coil 364 391 - -
Acco12g0826 442 CDD AP2 210 271 IPR001471 GO:0003700|GO:0006355
Acco12g0826 442 SMART rav1_2 112 181 IPR001471 GO:0003700|GO:0006355
Acco12g0826 442 SMART rav1_2 211 275 IPR001471 GO:0003700|GO:0006355
Acco12g0826 442 MobiDBLite consensus disorder prediction 55 76 - -
Acco12g0826 442 PRINTS Ethylene responsive element binding protein signature 251 271 IPR001471 GO:0003700|GO:0006355
Acco12g0826 442 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
Acco12g0826 442 ProSiteProfiles AP2/ERF domain profile. 211 269 IPR001471 GO:0003700|GO:0006355
Acco12g0826 442 Pfam AP2 domain 210 261 IPR001471 GO:0003700|GO:0006355
Acco12g0826 442 Pfam AP2 domain 111 167 IPR001471 GO:0003700|GO:0006355
Acco12g0826 442 ProSiteProfiles AP2/ERF domain profile. 112 175 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0826 Acco-ChrAcco12 7911779 7914715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0826 108 313 AP2-EREBP Transcription Factor Family AT5G57390 57.674 2.87e-76 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Acco12g0826 AP2 1.7e-07 CL0081