Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0821 ATGGGGTTGGGTGCTGATAATGCTAAGGTGGAGTCTTGGGATGTCAGCAAATCAAAGGCGAAGAAGAAGAAGAAGAAGAAAGATGATGGCGTTGTGGAAGAGGAAGAAACTGGGTGTTGGGTTGGGTTGAGGTTCCTTGGCAGTTGCATTTCTTCGAGATCCAAGGTTGATAGCTCAGTTAGCAGCCTCAGCACTCATTACGCTGAAAGTAAATCGACTATCGGCACAAGTAGAGATCAACCAACAGCTCCAGTAGTGTCTTCTACAACCACAAGTAACGCAGAAAGTAATTCATCCACCTCCAAACTTGAAGAGGAGCTTAAAGTTGCTTCCAGGCTGCGAAAGTTCTCTTTTAATGATCTTAAGCTGGCAACAAGAAACTTCCGGCCTGAAAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGATGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGTACAGGCCTTACAGTTGCTGTAAAAACCCTGAATCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTTAGTTTTCTTGGTGATCTAATTCATCCCAACCTTGTTAAACTTATTGGCTACTGTATTGAAGATGATCAAAGGTTGCTAGTTTATGAATTCATGCCTCGGGGAAGCCTGGAGAACCACCTATTTAGGAGATCCCTGCCGCTTCCGTGGTCCATCAGAATGAAAATTGCATTCGGAGCTGCAAAGGGTCTGGCATTTCTTCATGAGGAAGCTGAACGACCAGTAATATATAGGGATTTTAAAACTTCCAATATACTATTGGATGCGGAGTACAATGCCAAACTTTCGGATTTTGGACTTGCCAAAGATGGTCCAGAGGGTGACAAAACCCATGTATCCACCCGGGTGATGGGAACCTATGGTTACGCAGCACCAGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGATGTGTACAGTTTTGGAGTAGTTCTTCTTGAGATGATGACTGGCAGAAGATCTATGGACAAAAACCGACCCAATGGTGAACATAACCTTGTTGAATGGGCTCGGCCACATCTTGGAGAGAGAAGAAGGTTCTATAAGTTGATAGATCCTCGGTTAGAAGGTCACTTTTCTATAAAAGGAGCTCAAAAAGCTGCCCAACTGGCTGCTCACTGCCTTAGCAGAGATCCAAAAGCCAGACCCTTAATGAGTGAAGTTGTAGAAGCTCTAAAGCCTCTGCCAAACCTCAAGGACATGGCGAGCTCATCATATTATTTTCAGACAATGCAAGCCGACCGATTCAGTGCCAGCCCTAATACTCGAAATGGGCGAACACTGCTTAGCCGGAATGGGCAGCAGCAGAGGAGCCTTTCTATACCTCATGGCACTCATGCATCTCCTTATCATCACCAGTTTCCCCTAGAATCCCCTAAACCTAATGGCAAAGCACAGAGTTAA 1452 0.4497 MGLGADNAKVESWDVSKSKAKKKKKKKDDGVVEEEETGCWVGLRFLGSCISSRSKVDSSVSSLSTHYAESKSTIGTSRDQPTAPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVSFLGDLIHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAFGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMMTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYKLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSASPNTRNGRTLLSRNGQQQRSLSIPHGTHASPYHHQFPLESPKPNGKAQS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0821 483 Pfam Protein tyrosine and serine/threonine kinase 132 408 IPR001245 GO:0004672|GO:0006468
Acco12g0821 483 MobiDBLite consensus disorder prediction 69 100 - -
Acco12g0821 483 Gene3D Transferase(Phosphotransferase) domain 1 214 430 - -
Acco12g0821 483 MobiDBLite consensus disorder prediction 69 103 - -
Acco12g0821 483 PANTHER OS01G0588500 PROTEIN-RELATED 90 411 - -
Acco12g0821 483 MobiDBLite consensus disorder prediction 1 36 - -
Acco12g0821 483 MobiDBLite consensus disorder prediction 433 483 - -
Acco12g0821 483 Gene3D Phosphorylase Kinase; domain 1 87 213 - -
Acco12g0821 483 ProSitePatterns Protein kinases ATP-binding region signature. 134 166 IPR017441 GO:0005524
Acco12g0821 483 ProSiteProfiles Protein kinase domain profile. 128 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0821 483 CDD STKc_IRAK 134 411 - -
Acco12g0821 483 FunFam Serine/threonine-protein kinase BIK1 95 213 - -
Acco12g0821 483 MobiDBLite consensus disorder prediction 433 459 - -
Acco12g0821 483 FunFam Probable serine/threonine-protein kinase PBL8 214 429 - -
Acco12g0821 483 SUPERFAMILY Protein kinase-like (PK-like) 114 433 IPR011009 -
Acco12g0821 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0821 Acco-ChrAcco12 7874613 7879063 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0821 97 408 Glycoside Hydrolase AT3G07070 56.467 1.36e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco12g0821 PK_Tyr_Ser-Thr 8e-47 CL0016