Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0797 ATGGTACAGATCCGTCTCTGTGAAGTGCCTTGCGCGAGTTTTCTGCTTCTTTCACGCGTTTGCGTTCCTTCCTCTCTCCTCCTTCATATATACAGAAATCTTCTCCGTTGGGTTGAACTCTACCCTTCACTCACAGACTCAACCCAGAGACTCCGGCAAAGTCAGAATCAAAGTTTGTTCATCTTCAACCCAATTTTCACAGATACTTCCACACAATTCTGTCAGAAGTTGGCGAAAATGGGGGCTGGCGACTACTACAGGATCCTCAAGGTGAATCGTAATGCAACCGATGAGGAGCTCAAGAAGGCGTATAAGAGATTGGCTATGAAATGGCATCCAGATAAGAATCATCAACAATCTGCCAACAAAGAGGACGCTGAGGCTAAATTCAAGCAGATATCTGAGGCTTATGATGTTCTCAGCGATCCCAAGAAGCGTCAGATCTATGATTTTTACGGTCATTATCCACTCAATTCTAGTCGAGTTGATAAGAAAGACGGTAGGAACGAGGAAACTGGGAGCCAGAAGGACAAGAAAGTGGGGGCGATTGAGAGTAAATTGGCTTTTAGCCTCGAAGAACTTTACAGAGGTAGCAAAAGGAAGATGAAAGTCTCGAGGAACGTTCCTGATGAATTTGGCAAGTTGAACACCATTGAAGAAATCTTAAAGATTGATATTAAACCTGGTTGGAAGAAGGGCACAAAAATAACTTTTCCTGGGAAAGGCCACCAAGAACCAGGATGTGCCCCATCAGATCTAATCTTTGTGGTCGAGGAGAAATCTCATCCATTGTTCAAGAGAGAAGGAAATGATTTGGTTCTTGTCCAGAAGATATTACTTCTTGAGGCTCTCGTTGGAAAGACTCTGAACCTGAAAACATTGGATGGAAGAGACCTCACAATTCAAGTGAAGGATGTTGTTGAACCAGGCTACGAGCTCGTGGTCCCAGATGAAGGGATGCCCATTTCAAAGGAACCAGGCAAGAAGGGGACACTAAGAATTAAGTTTGATGTTATGTTTCCTTCAAGGCTGACCACACAACAAAAGTATGAACTGAAAAGGATTCTGAGGGACGCTGATAACTAA 1086 0.4365 MVQIRLCEVPCASFLLLSRVCVPSSLLLHIYRNLLRWVELYPSLTDSTQRLRQSQNQSLFIFNPIFTDTSTQFCQKLAKMGAGDYYRILKVNRNATDEELKKAYKRLAMKWHPDKNHQQSANKEDAEAKFKQISEAYDVLSDPKKRQIYDFYGHYPLNSSRVDKKDGRNEETGSQKDKKVGAIESKLAFSLEELYRGSKRKMKVSRNVPDEFGKLNTIEEILKIDIKPGWKKGTKITFPGKGHQEPGCAPSDLIFVVEEKSHPLFKREGNDLVLVQKILLLEALVGKTLNLKTLDGRDLTIQVKDVVEPGYELVVPDEGMPISKEPGKKGTLRIKFDVMFPSRLTTQQKYELKRILRDADN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0797 361 Pfam DnaJ domain 84 150 IPR001623 -
Acco12g0797 361 SUPERFAMILY HSP40/DnaJ peptide-binding domain 265 349 IPR008971 GO:0006457|GO:0051082
Acco12g0797 361 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 80 356 - -
Acco12g0797 361 SMART dnaj_3 83 145 IPR001623 -
Acco12g0797 361 CDD DnaJ 84 142 IPR001623 -
Acco12g0797 361 Gene3D - 181 261 - -
Acco12g0797 361 SUPERFAMILY HSP40/DnaJ peptide-binding domain 184 263 IPR008971 GO:0006457|GO:0051082
Acco12g0797 361 SUPERFAMILY Chaperone J-domain 79 157 IPR036869 -
Acco12g0797 361 FunFam Dnaj homolog subfamily b member 178 260 - -
Acco12g0797 361 ProSiteProfiles dnaJ domain profile. 84 153 IPR001623 -
Acco12g0797 361 ProSitePatterns Nt-dnaJ domain signature. 130 149 IPR018253 -
Acco12g0797 361 Gene3D DnaJ domain 70 176 IPR036869 -
Acco12g0797 361 FunFam DNAJ heat shock family protein 261 356 - -
Acco12g0797 361 Gene3D - 262 342 - -
Acco12g0797 361 Pfam DnaJ C terminal domain 183 341 IPR002939 -
Acco12g0797 361 CDD DnaJ_C 183 344 - -
Acco12g0797 361 PRINTS DnaJ domain signature 125 145 IPR001623 -
Acco12g0797 361 PRINTS DnaJ domain signature 145 164 IPR001623 -
Acco12g0797 361 PRINTS DnaJ domain signature 104 119 IPR001623 -
Acco12g0797 361 PRINTS DnaJ domain signature 86 104 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0797 Acco-ChrAcco12 7627662 7629916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0797 85 152 C2H2 Transcription Factor Family AT1G74250 36.232 3.10e-09 56.6