Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0782 ATGTCTTCTCCTTCAACCTTCCCCTTCCCCTTCTTCACTCTCTCCTTCCTCCTCTTCTGTTTCATTTCGCACCCTGCTTCTGCTCACACTCACACTTGCTCTTCACACTCACGGAGCTCTTCGTCTTCTTCATCTTCTTCTCTTTGCCCTCCTTTCTCTTCAAACCCTCCTTTCCCATTCTCTTTCTCTCCAGGTTGTGGCCACCCTTCCTTCCAAATCCAATGTTCAACTCCTCAGTCCATCATCTCCATTAACAACTTAACCTTCTCTATTCTTACCTATAACCAGAATTCCTCTTCTCTCACCCTTTTGCCTCATCTTGATTATGCAACAACCTCAGCTACCCACAGAAATTGCTCCACTCCTCGCTTGCTTTCTATTCTCAATCGTTCTCTTGATCTCTCTGGCTCTCCTTTCAGAATCTCCGATGCTCTCTGTTCTCGCCTCTCTGATATCCGACCTTGTTCGCTTCCTTCTCTGCCTAACTGTAGCCACTGTCCATGGGAATGTAGCCTCATCAAGAACCCAGCTCACCTCCTCCTTGACTGTGGATCTGCCCATCGCTCCGTTTCAGACTCAGAGAATCGCTGCGAAAGTGATGTTTTGGGGTATATCAACGACACACTTGCTCGAGGGATCGAAGTTGAGTGGGATGAAGATCAAGATCCTTACTTTTCAAGCTGCAGAAACTGTAGCTCAAACGCGGGAGTTTGTGGATTCAATTCATCCGACCCACATAACCAATTTATATGCTTTCGCTCCAAATCTGAATCTAGTTTTACTCCGGGTTGGATTCAAAGTGTGAATCCCAAGCGTAACACAGTTTTGTCTCTTGTCGTCCCTTTAATGTTGTTTCTTCTTTTTGTTTCTGTTGTTACTGCAATTTTCCGGTCCAGAAGATTCAAGTCATCGAAGACAGAGGAAGACCCAACAATCCTTTTTCTTCACAACCAGCGATCCGCCAGTCTTCTTCCTCCGGTATTCACTTACGAGGAATTGGAGGCGGCCACTAATCGGTTCGACCCGAAACGCAAAATTGGCGATGGCGGGTTCGGGTCGGTGTACTTGGGTCAGCTCCATGATAGCAGGATTGTCGCCGTGAAGTGCCTCCATAATCACCACACGGAGGTCGCCGCGGGACGAGCTTTTTGCGCAAAGTCTTTCTGCAACGAAATTTTGATTCTTTCTTCCATCGACCACCCGAATCTAGTCAAGCTTCATGGATATTGCAGCGACCCGAGAGGATTGCTTCTGGTCTATTACTATGTCCCGAATGGAACTCTCGCTGAACATCTTCACGGTCCCAAGAGTTCATTCCGAAAGGGATCTCTGACGTGGCAAGTGAGGCTCGATATTGCTCTGCAAACAGCATTAGCCATGGAGTACCTTCACTGCTCTGTTGTGCCACCAATAGTTCACAGAGACATTACTTCGTCTAACATCTTCGTGGAGAAAGATATGAGGATTAAAGTCGGAGACTTTGGGCTGTCTAGGCTATTGGTTTTGCAGGATACGTCGTCGCCTTCAACTGGGTATGTCTGGACGGGTCCACAAGGTACACCCGGGTATTTGGATCCGGATTACCATCGGTCGTTCCGGTTAACGGAGAAGAGTGATGTGTATAGCTTTGGGGTGGTGTTGCTGGAGCTGATTTCCGGGTTGAAGGCGGTGGATCAGAACAGGGATAAGCGGGAAATCGCGTTGGCTGATATGGTGGTATCTAGAATCCATATGGGGCAGTTGAATCAGGTGGTGGACCCGGTTTTGGCGAAGGAGGAAGTAATGGACGCCGTCGCCGCGGTGGCGGAGCTGGCGTTCCGTTGCGTGGCGGCAGACAAGGACGACCGGCCGGACTCCAAAGAAGTGGTGGAGGAGCTGAAACGGGTACGGGCCCAGACGCTGGCGCGTCTCCGATCGTCGTCGAATTCCCACACCGGTGCTGACGTGGCGAAGAACAATGAAGTGAGGGAATGTGGATTGTGA 1983 0.4957 MSSPSTFPFPFFTLSFLLFCFISHPASAHTHTCSSHSRSSSSSSSSSLCPPFSSNPPFPFSFSPGCGHPSFQIQCSTPQSIISINNLTFSILTYNQNSSSLTLLPHLDYATTSATHRNCSTPRLLSILNRSLDLSGSPFRISDALCSRLSDIRPCSLPSLPNCSHCPWECSLIKNPAHLLLDCGSAHRSVSDSENRCESDVLGYINDTLARGIEVEWDEDQDPYFSSCRNCSSNAGVCGFNSSDPHNQFICFRSKSESSFTPGWIQSVNPKRNTVLSLVVPLMLFLLFVSVVTAIFRSRRFKSSKTEEDPTILFLHNQRSASLLPPVFTYEELEAATNRFDPKRKIGDGGFGSVYLGQLHDSRIVAVKCLHNHHTEVAAGRAFCAKSFCNEILILSSIDHPNLVKLHGYCSDPRGLLLVYYYVPNGTLAEHLHGPKSSFRKGSLTWQVRLDIALQTALAMEYLHCSVVPPIVHRDITSSNIFVEKDMRIKVGDFGLSRLLVLQDTSSPSTGYVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQNRDKREIALADMVVSRIHMGQLNQVVDPVLAKEEVMDAVAAVAELAFRCVAADKDDRPDSKEVVEELKRVRAQTLARLRSSSNSHTGADVAKNNEVRECGL 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0782 660 Pfam Protein kinase domain 342 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0782 660 ProSitePatterns Tyrosine protein kinases specific active-site signature. 471 483 IPR008266 GO:0004672|GO:0006468
Acco12g0782 660 MobiDBLite consensus disorder prediction 637 660 - -
Acco12g0782 660 CDD STKc_IRAK 346 628 - -
Acco12g0782 660 FunFam Putative serine/threonine-protein kinase At1g18390 family 316 422 - -
Acco12g0782 660 Gene3D Phosphorylase Kinase; domain 1 316 422 - -
Acco12g0782 660 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Acco12g0782 660 Pfam Wall-associated receptor kinase C-terminal 201 254 IPR032872 -
Acco12g0782 660 Gene3D Transferase(Phosphotransferase) domain 1 423 653 - -
Acco12g0782 660 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 14 633 IPR044652 GO:0004672
Acco12g0782 660 SUPERFAMILY Protein kinase-like (PK-like) 324 633 IPR011009 -
Acco12g0782 660 ProSiteProfiles Protein kinase domain profile. 340 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0782 Acco-ChrAcco12 7392921 7394903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0782 49 652 Receptor kinase-like Gene Family AT1G69910 63.942 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco12g0782 Pkinase 3.8e-42 CL0016