Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0761 ATGGATCCGGCGGCTATCAATCTGATGAACGAGGGTTCGTTTGCGAATGGGAACGCCAATACGGCGTCGTATAACTTGGCGGAGATCTGGCAGTTCCCGATGAACGGCGGTGCGGGTCTCGGGGAGTCTGGAGGTGGGTTGGGCTTGAGGAGGCCGCAGTTTGGACAAAATTTGGGGCAGTTTGGCGATTTTACGTCGGGTCCGAACCCGATTGCCCCGGGTAATAATCCGAACTGTTCGGAGCAGGGAGCGAATGGTGTTAATAAGAAGCGCGATTCCGAAGATGAATTGGCGACATGCGTCTCCACCACCAGCAACGGTGGCATTGGCCGTAGCAATGGCGTGAATGATGGTGATGGAAAACGTCTTAAATTATCAGGCAACAGGAATGAGGGCCACGAATCTAAAGCTGAAACAGAAACCAGTTCAGAGAAGCCAGAGGAGCAAAGTACTGAGCCAGCTTCTGAGCCTCCTAAGCCAGCTTACATCCATGTACGGGCAAGAAGGGGCCAAGCTACTGATAGCCACAGTCTAGCGGAAAGAGCTAGGAGGGAAAAGATAAGTGAGAGGATGAAAATTCTTCAGGAGGTGGTTCCTGGTTGTAACAAGGTTATTGGGAAAGCTTTGGTCCTCGATGAGATAATAAATTACATTCAGTCACTACAGCATCAAGTTGAGTTCTTGTCAATGAAGCTTGAAGCTGTAAATTCAGGAGCTAACCCTGGCATTGAAATTTTTCCTCCTAAAGATTTTGGTCAACAAACATTTGACATGGTAATTGGTTCTCAAGCTCCGCGAGATCAGTTCAGCCGGGGTTCATCACCAGAATGGTTACACATGCAGGTAGGAGGAGGTGGATTTGAAAGAACAACATGA 876 0.4886 MDPAAINLMNEGSFANGNANTASYNLAEIWQFPMNGGAGLGESGGGLGLRRPQFGQNLGQFGDFTSGPNPIAPGNNPNCSEQGANGVNKKRDSEDELATCVSTTSNGGIGRSNGVNDGDGKRLKLSGNRNEGHESKAETETSSEKPEEQSTEPASEPPKPAYIHVRARRGQATDSHSLAERARREKISERMKILQEVVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSGANPGIEIFPPKDFGQQTFDMVIGSQAPRDQFSRGSSPEWLHMQVGGGGFERTT 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0761 291 MobiDBLite consensus disorder prediction 122 152 - -
Acco12g0761 291 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 236 IPR036638 GO:0046983
Acco12g0761 291 CDD bHLH_AtBPE_like 162 246 - -
Acco12g0761 291 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 221 IPR011598 GO:0046983
Acco12g0761 291 MobiDBLite consensus disorder prediction 63 159 - -
Acco12g0761 291 Gene3D - 168 240 IPR036638 GO:0046983
Acco12g0761 291 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 85 259 IPR024097 GO:0006355
Acco12g0761 291 Pfam Helix-loop-helix DNA-binding domain 175 222 IPR011598 GO:0046983
Acco12g0761 291 SMART finulus 177 227 IPR011598 GO:0046983
Acco12g0761 291 MobiDBLite consensus disorder prediction 63 86 - -
Acco12g0761 291 MobiDBLite consensus disorder prediction 98 112 - -
Acco12g0761 291 FunFam Basic helix-loop-helix transcription factor 168 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0761 Acco-ChrAcco12 7217358 7219434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0761 1 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 53.516 3.22e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco12g0761 HLH 7.5e-08 No_clan