Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0748 ATGAAGAGGTCCAGAGACGATGGTTATATGAACTCTCAACTTAAACGGCCCATGGTGTCTTCCCGAGGAGAAACATCGGGGCAGCCCCAGGAGATGGCTGGAAGTGCTCAAAAACTCACAACAAATGACGCCTTAGCATATCTCAAGGCAGTAAAGGAAATCTTTCAAGATAAAAGGGAGAAATATGATGATTTTTTAGAAGTCATGAAGGATTTCAAGGCTCAAAGAGTTGATACTGTGGGTGTCATAGCAAGAGTGAAGGAACTGTTTAAAGGGCACAGAGCTCTAATTTTGGGATTTAACACCTTCTTGCCCAAGGGGTATGAAATCACACTTCCTTTGGATGAAGAACAACCTGTGCAAAAGAAGCCTGTTGAATTTGAAGAAGCTATAAATTTTGTCAACAAAATTAAGTCTCGCTTTCAAGGTGATGATCATGTCTACAAGTCGTTTCTAGACATATTGAATATGTACAGAAAGGAGAACAAGTCTATTTCTGAGGTCTACCAGGAGGTTGCCTCACTTTTCCATGACCACCCAGATCTTCTTGATGAGTTTACACATTTTCTTCCTGATACTTCAGCATCAGCCTCTACACATCATGCCACTTCTCGGAACTCTATGCTTAGGAGCTCTGCAGTGCCGAGGCAAATGAGTGTTGAAAAGAGAGAAAGGACTGTGGATTCTCATGGTGATCATGACCCTAGTGTTGATCGTTCTGATCCAGATCATGACAGAGTTATGATTAAGGCAGAAAAGGAGCAGAGGAGGCGTGCTGAGAAGGAAAAGGACCTCAAAGAAGAGAGGGATAGGAGAGATCAGGAACGGGATGATAGAAATTATGAGCCTGATGGTAGCCTCCCACCCAAACGGAAATATGGTCAGAGGACAGATGACACTGGTGCCGAACCATTGCATCAAGGTGGCAATTCTGATGAAAATTTGAGCATGCGCCCTATGCCATCCACCTGTGATGACAAAAGTTCTGTTAAGAGTATGTATAGTCAAGAGTTTGCTTTCTGTGAAAAAGTCAAGGAGAAATTACGAAATCCTGACGTATATCAGGAATTTTTGAAGTGCCTACATATCTATAGCAGGGAAATAATTACCCGGCAAGAATTGGAATCCTTGGTGGGTGATTTACTGGGAAAATATCCAGACCTTATGGAAGGGTTTAATGAATTTTTGTCCAGATGTGAGAAGAATGATGGATTCCTTGCTGGTGTAATGAATAAAAAGTCCTTTTGGAATGAAGGGATTGCATCTAAACCAGCAAAGGTTGAGAACAAGGATAGAGATAGACCTCGAGATCATGATAGGGATGATCGGATTAGAGAAAGAGATCGTGAACTCCGAGAAAGGGACAAATCTTCTGCTTTTATTAGCAAGGATGTTTCAGGTCCTAAGATGTATCCATATTCCAGCAAGGATAAGTATTACATGAAACCTATAAATGAGCTAGACCTTTCTAACTGTGAGCAATGCACTCCCAGCTACCGATTCCTACCAAAAAATTATCCGATACCCATGGTTAGCCAGAGAACTGAGCTTGGTGGTGAAGTAGTGAATGATCATTGGGTTTCTGTAACTTCAGGAAGTGAAGATTATTCTTTTAAACACATGCGCAAAAATCAGTATGAAGAGAGCCTGTTTAGATGTGAAGATGACAGGTTTGAACTTGATATGTTGTTAGAGTCTGTGAATGTGACGACAAAGCGAGTAGAAGAGCTCCTAGAAAAGATCAATAATAATACTATTAAATCAGATAGCCCTATTCGTCTTGAGGATCACTTGACAGGATTCCTTCCTCTTTTTGTTCTCTTAGCTCTAAATCGAAGGTGCATTGAACGATTATATGGTGATCATGCTCTTGATGTGATGGAGGTGTTGAGAAAGAATGCACCTCTAGCTTTACCTGTTATATTAAGCCGTTTGAAGCAGAAACAAGAAGAGTGGGCTAGGTGCCGCGCAGATTTTAATAAAGTTTGGGCTGAAATATATGCTAAGAATTATCACAAATCGCTTGATCATCGCAGCTTCTACTTTAAGCAACAGGATACAAAAAGCTTGAGCACAAAAGCCTTAGTGGGAGAAATAAAAGAGATCAGTGAGAAGAAACACAAAGAAGATGATGTTCTTCTTGCAATTGCCGCTGGAAATAGACGACCTATTATTCCAAATTTGGAATATGAGTATTCCGACCCAGCTATTCATGAAGATCTGTATCAACTCATAAAATATTCCTGTGGAGAAGTTTGCACAACTGAACAGTTGGATAAAGTTATGAAGATTTGGACTACATTTTTAGAACCAATGCTCGGTGTTCCTTCTCGACCCCAGGGTGCTGAGGATACAGAAGATGTCGTCAAGGCTAAGCATAGTTCTGTCAATGGTGGCAGTGATGGTAGTCCTAGTGTCGTTGCAAATGTAATGAATTCAAGGCAATTAAATACGTCTGGAAATGGGGATGAAAGTATTTCATTAGAACAGTCAAATTCCAAGACTGAAACTTTGGATCATGGTAAACATCATGAGGGAACGCATATAAATTCATCCGTGCCTGATGAGGTATTAGCGGCCAACAAACAAGGTCATTCCAATGAACAGTTGGTGAATGCTAATGTCTTAATGGCTTCTGGAACTGAACACGGTAATGGGAGAACAAACATAGAGAATGCATCAGGGCTTACTGCTACTACATTAAGACCTGGTAATGCTGCTGCCGAGGGAGGCCATTTTCCTTCATCTGAGGTTGGAGATTCTACAAGACCAGCTACTCCTGTAAATGGGACCATCACAGAAAGCAACAAAGTTCACAGGTACCAAGAAGAACCTGCTGGGCACTTCAAAAGTGAAAGAGAAGAGGGTGAACTATCTCCTAATGGAGATTTTGAGGATAACTTTGCAGCATATGGAGATGTTGGTCTAGCAGCAGTAGGGCATAAAGGAAAGAATGGTAGTGTGAGTTTGCAATACCAAAATAGACGTGAAGAAGGTTGTGGTGAGGCAGCAGGAGAAAATGATGCTGATGTTGATGAAGGTGAAGGAAGTCCTCATAGGTCATCACAGGACAGTGAGAATGCTTCTGAAAATGGTCATGTTTCGGGAAGTGAGTCTGCTGATGGTGAGGAGTGTTATCAAGAAGAGCATGATGAGGATGAGGAACATGATAACAAGGTTGAGAGTGAGGGTGAAGCTGAAGGAATGGCTGATGCCAATGATGTGGAAGGAGATGGAATCTCATTGCCGTTTTCAGAACGCATTTTCCTATCTGTAAAGCCTCTGGCAAAGCATGTTCCCCCTATGTTGCATGAGAAAGAAAGGGTTTCTAGAGTTTTTTATGGAAACGATTCCTTATATGTGCTTTTTAGGCTTCACCAAACATTGTATGAGAGGATACAGTCAGCAAAGTTGAACTCATCATCTGCAGATAGGAAGTGGAGGGCTTCAAATGATGTAAACTCAAATGATCAATATGGCAGATTCATGACAGCCCTTTATAACCTGCTGGATGGTTCTTCTGATAACACAAAATTCGAGGATGACTGCCGAGCTATTATTGGAACTCAGTCATATGTGTTATTTACATTAGACAAGTTGATATATAAGCTTGTTAAACAGCTGCAAGCAGTTGCTACTGATGATATGGATAACAAGCTTCTCCAACTTCATTCATACGAGAAATCAAGGAAATCTGGAAGATTTTTTGATATGGTTTATTATGAAAATGCTCGAGTTCTTCTTCATGATGAAATGATATACCGTATTGAATGTTCCTCTACACCAACGCAATTATCTATTCAGTTGATGGACTATGGACATGATAAGCCTGAAGCAACTGCTGTGTCTATGGACCCTAACTTTTCAGCTTATTTGCACAATGACTTCCTCTCTGTTTTTCCTGAAAAAAAGAAGTCAGGGATTTTCCTGAAGAGGAATAAACGCAAATATGCCTGTGGTGATGAACTTTCAAGCCAGGCCATGGAAGGATTACGGGTCATCAATGGTCTAGAGTGTAAGATAGCTTGCAGTTCATCTAAGGTTTCATACGTTTTGGATACAGAAGACTTTTTATTTCGAATGAGAAGGAAGAGGAAAACTTTGCATCAGAACAGATTATTTGGATATGGTGTTCTCAAGCTAGTAATTCTTATAATGAGAGCGCATTTAGGGAGTTTGGCCCTTCAATTCAGTGACTTGTGCGAGCAACACTGA 4215 0.4078 MKRSRDDGYMNSQLKRPMVSSRGETSGQPQEMAGSAQKLTTNDALAYLKAVKEIFQDKREKYDDFLEVMKDFKAQRVDTVGVIARVKELFKGHRALILGFNTFLPKGYEITLPLDEEQPVQKKPVEFEEAINFVNKIKSRFQGDDHVYKSFLDILNMYRKENKSISEVYQEVASLFHDHPDLLDEFTHFLPDTSASASTHHATSRNSMLRSSAVPRQMSVEKRERTVDSHGDHDPSVDRSDPDHDRVMIKAEKEQRRRAEKEKDLKEERDRRDQERDDRNYEPDGSLPPKRKYGQRTDDTGAEPLHQGGNSDENLSMRPMPSTCDDKSSVKSMYSQEFAFCEKVKEKLRNPDVYQEFLKCLHIYSREIITRQELESLVGDLLGKYPDLMEGFNEFLSRCEKNDGFLAGVMNKKSFWNEGIASKPAKVENKDRDRPRDHDRDDRIRERDRELRERDKSSAFISKDVSGPKMYPYSSKDKYYMKPINELDLSNCEQCTPSYRFLPKNYPIPMVSQRTELGGEVVNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKSDSPIRLEDHLTGFLPLFVLLALNRRCIERLYGDHALDVMEVLRKNAPLALPVILSRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALVGEIKEISEKKHKEDDVLLAIAAGNRRPIIPNLEYEYSDPAIHEDLYQLIKYSCGEVCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKHSSVNGGSDGSPSVVANVMNSRQLNTSGNGDESISLEQSNSKTETLDHGKHHEGTHINSSVPDEVLAANKQGHSNEQLVNANVLMASGTEHGNGRTNIENASGLTATTLRPGNAAAEGGHFPSSEVGDSTRPATPVNGTITESNKVHRYQEEPAGHFKSEREEGELSPNGDFEDNFAAYGDVGLAAVGHKGKNGSVSLQYQNRREEGCGEAAGENDADVDEGEGSPHRSSQDSENASENGHVSGSESADGEECYQEEHDEDEEHDNKVESEGEAEGMADANDVEGDGISLPFSERIFLSVKPLAKHVPPMLHEKERVSRVFYGNDSLYVLFRLHQTLYERIQSAKLNSSSADRKWRASNDVNSNDQYGRFMTALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQAVATDDMDNKLLQLHSYEKSRKSGRFFDMVYYENARVLLHDEMIYRIECSSTPTQLSIQLMDYGHDKPEATAVSMDPNFSAYLHNDFLSVFPEKKKSGIFLKRNKRKYACGDELSSQAMEGLRVINGLECKIACSSSKVSYVLDTEDFLFRMRRKRKTLHQNRLFGYGVLKLVILIMRAHLGSLALQFSDLCEQH 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0748 1404 MobiDBLite consensus disorder prediction 217 299 - -
Acco12g0748 1404 ProSiteProfiles PAH domain profile. 330 399 IPR003822 GO:0006355
Acco12g0748 1404 Coils Coil 564 584 - -
Acco12g0748 1404 MobiDBLite consensus disorder prediction 1042 1060 - -
Acco12g0748 1404 SUPERFAMILY PAH2 domain 37 106 IPR036600 GO:0006355
Acco12g0748 1404 MobiDBLite consensus disorder prediction 195 328 - -
Acco12g0748 1404 MobiDBLite consensus disorder prediction 426 451 - -
Acco12g0748 1404 PANTHER SIN3B-RELATED 37 1257 IPR039774 GO:0003714
Acco12g0748 1404 Gene3D Paired amphipathic helix 121 194 IPR036600 GO:0006355
Acco12g0748 1404 SMART hdac_interact2seq4b 491 591 IPR013194 -
Acco12g0748 1404 FunFam Paired amphipathic helix SIN3-like protein 122 193 - -
Acco12g0748 1404 MobiDBLite consensus disorder prediction 775 852 - -
Acco12g0748 1404 MobiDBLite consensus disorder prediction 195 214 - -
Acco12g0748 1404 FunFam Paired amphipathic helix protein Sin3 43 105 - -
Acco12g0748 1404 Gene3D Paired amphipathic helix 43 105 IPR036600 GO:0006355
Acco12g0748 1404 MobiDBLite consensus disorder prediction 919 936 - -
Acco12g0748 1404 MobiDBLite consensus disorder prediction 14 36 - -
Acco12g0748 1404 Coils Coil 249 278 - -
Acco12g0748 1404 MobiDBLite consensus disorder prediction 835 850 - -
Acco12g0748 1404 MobiDBLite consensus disorder prediction 796 834 - -
Acco12g0748 1404 MobiDBLite consensus disorder prediction 307 328 - -
Acco12g0748 1404 MobiDBLite consensus disorder prediction 937 960 - -
Acco12g0748 1404 SUPERFAMILY PAH2 domain 121 192 IPR036600 GO:0006355
Acco12g0748 1404 Pfam Sin3 family co-repressor 493 585 IPR013194 -
Acco12g0748 1404 Gene3D Paired amphipathic helix 328 401 IPR036600 GO:0006355
Acco12g0748 1404 SUPERFAMILY PAH2 domain 330 397 IPR036600 GO:0006355
Acco12g0748 1404 MobiDBLite consensus disorder prediction 1 36 - -
Acco12g0748 1404 Pfam Paired amphipathic helix repeat 352 396 IPR003822 GO:0006355
Acco12g0748 1404 Pfam Paired amphipathic helix repeat 60 104 IPR003822 GO:0006355
Acco12g0748 1404 Pfam Paired amphipathic helix repeat 146 190 IPR003822 GO:0006355
Acco12g0748 1404 MobiDBLite consensus disorder prediction 1021 1036 - -
Acco12g0748 1404 MobiDBLite consensus disorder prediction 996 1077 - -
Acco12g0748 1404 FunFam Paired amphipathic helix protein SIN3 328 401 - -
Acco12g0748 1404 ProSiteProfiles PAH domain profile. 123 193 IPR003822 GO:0006355
Acco12g0748 1404 MobiDBLite consensus disorder prediction 901 965 - -
Acco12g0748 1404 ProSiteProfiles PAH domain profile. 37 107 IPR003822 GO:0006355
Acco12g0748 1404 Pfam C-terminal domain of Sin3a protein 1113 1358 IPR031693 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0748 Acco-ChrAcco12 7049018 7058495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0748 33 120 WRKY Transcription Factor Family AT4G12020 57.955 1.37e-21 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco12g0748 Sin3a_C 2.5e-57 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0908 11 19676235 19685761 Acco12g0748 12 7049018 7058495 CCT
Acco12g0748 12 7049018 7058495 Acco12g0748 12 7049018 7058495 ECH