Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0742 ATGGAGGTCTGTGATCTCTTGCCGGCAGATTCTGACGAGGTTCATGTCTTGGCCGTCGATGACAGCCTCGTCGATCGGAAAGTCATCGAGCGCTTGCTCAGGATTTCAGCTTGTAAAGTCACTGCTGTGGACAGTGGAATTAGAGCTCTGCAATTCCTTGGACTTGACGACCAGAAATCTCCTTCCGAATCGGACGGCTTTGATGGCTTAAAGGTGGATCTAATCATCACTGACTACTGCATGCCTGGAATGACCGGCTATGAATTACTCAAGAAAATCAAGGAATCATCCACCTTCAGAGAAATTCCAGTGGTGATCATGTCCTCTGAGAACGTTTTGCCCCGAATAGACAGGTGTTTGGAAGAAGGGGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCAGACGTGAAGCGGTTAAGGGATTCCATGACGACAAGAGAGAGAGAAGTTAAGGCGGGAAATCAGGAGAGAGAAGGCGGTGTCAGGTTCACCAAAAGGAAGCTCACGGAATCTTCTGATCTGGATTCATCGCCGCCGTCCGTTACATCCTCATCGGCTCTGTCATCGTCTCCGTCTTCGCCGTCTGACTCTGCTTCGCCGCCGTCGTCCCCTTCACCTTCGCCTTCCCCACTCGACTCTCCGATCAGACGGCTTAGAATGACCACCAACGATTGA 678 0.5059 MEVCDLLPADSDEVHVLAVDDSLVDRKVIERLLRISACKVTAVDSGIRALQFLGLDDQKSPSESDGFDGLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLRDSMTTREREVKAGNQEREGGVRFTKRKLTESSDLDSSPPSVTSSSALSSSPSSPSDSASPPSSPSPSPSPLDSPIRRLRMTTND 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0742 225 ProSiteProfiles Response regulatory domain profile. 15 145 IPR001789 GO:0000160
Acco12g0742 225 MobiDBLite consensus disorder prediction 198 212 - -
Acco12g0742 225 MobiDBLite consensus disorder prediction 143 173 - -
Acco12g0742 225 SMART REC_2 14 141 IPR001789 GO:0000160
Acco12g0742 225 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 181 IPR045279 GO:0009736
Acco12g0742 225 MobiDBLite consensus disorder prediction 143 225 - -
Acco12g0742 225 CDD REC_typeA_ARR 16 140 - -
Acco12g0742 225 Pfam Response regulator receiver domain 16 137 IPR001789 GO:0000160
Acco12g0742 225 Gene3D - 14 187 - -
Acco12g0742 225 MobiDBLite consensus disorder prediction 174 197 - -
Acco12g0742 225 SUPERFAMILY CheY-like 14 145 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0742 Acco-ChrAcco12 6982469 6983501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0742 8 215 Response Regulator Gene Family AT1G59940 63.942 2.62e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco12g0742 Response_reg 3.4e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0742 12 6982469 6983501 Acco13g0655 13 4786948 4788571 ECH
Acco12g0742 12 6982469 6983501 Acco12g0742 12 6982469 6983501 ECH