Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0733 ATGAAGCTCCCCTCTTATTCCACATGTTGGGATAGTGATATGCTTGATGACACCACTCCTACTTGGAATTCTCCTTCCCAAAAGCAAAGAAGCCAGACAATAATATGTGCATTTCTACCTGATACATCTCATTTTCCCCTGAGAAAAATGGAAAGAGAACATGGCTGTGATATTTCTCCTTCATGGGATAATAATGGAGAAAATGGCCATTCTTCTGTGGAAAAGAGGCTGAGGCTATTTGGGTTTGAGCTGAACCCATCTCAGATCAACGAGGCCTGTGTCAAAGACTCTGTGGAAGCATACGAAGAAAGTGCGAACTCTTCGAACTCGGTTTCATCAGGAGGGGAGAAACCTGAGCAGCAGGAGAAGAGTTCATCTGCAACAAGAGACAACACATCAGATCATGAAAGAAAGTTCGAGTGCCAATATTGTTCCAAGGAATTCGCAAACTCGCAAGCGTTAGGAGGTCACCAGAATGCTCATAAGAAAGAGAGAATGAAGAAAAAGAGGTTGCAGCTTCAAGCCAGGAAGGCTAGCTTAAGCTACTACCTTCATCCTTTTCAGAACAACCGTGGTTTTTCCTTCCACGGCTCTAATACGCCTTGGTTCTATGACCCCTCTTCTTATAACTACTCTGAGTTTTCTTTGTATGAAGAACCTCAGATTAGCTTCAAAACCAATGATCAAGATGCCGTTAATATTCTTAATGGTTTTGATCAGAAATCAAATTGGAATTATTCTCATAATCCATCATCCCTTTCCCTTCCTTCTAAACAAGATACTTGTATGTTCACTTTATCACATACAGATCATAATAGGCCTTTCAACTTCCCAGCAGCTTCAAACCAGAGCCATAGTAATAAGGGTTTGGATCTTCAACTAGGCCTCACTTTGCAGTCAAATACACATAATTTAGCATAG 921 0.4115 MKLPSYSTCWDSDMLDDTTPTWNSPSQKQRSQTIICAFLPDTSHFPLRKMEREHGCDISPSWDNNGENGHSSVEKRLRLFGFELNPSQINEACVKDSVEAYEESANSSNSVSSGGEKPEQQEKSSSATRDNTSDHERKFECQYCSKEFANSQALGGHQNAHKKERMKKKRLQLQARKASLSYYLHPFQNNRGFSFHGSNTPWFYDPSSYNYSEFSLYEEPQISFKTNDQDAVNILNGFDQKSNWNYSHNPSSLSLPSKQDTCMFTLSHTDHNRPFNFPAASNQSHSNKGLDLQLGLTLQSNTHNLA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0733 306 PANTHER ZINC FINGER PROTEIN 5 68 299 IPR044299 GO:0010090
Acco12g0733 306 ProSiteProfiles Zinc finger C2H2 type domain profile. 139 166 IPR013087 -
Acco12g0733 306 MobiDBLite consensus disorder prediction 104 121 - -
Acco12g0733 306 ProSitePatterns Zinc finger C2H2 type domain signature. 141 161 IPR013087 -
Acco12g0733 306 Pfam C2H2-type zinc finger 139 164 - -
Acco12g0733 306 MobiDBLite consensus disorder prediction 104 134 - -
Acco12g0733 306 SUPERFAMILY beta-beta-alpha zinc fingers 135 166 IPR036236 -
Acco12g0733 306 Gene3D Classic Zinc Finger 114 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0733 Acco-ChrAcco12 6856323 6858525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0733 58 228 C2H2 Transcription Factor Family AT1G10480 40.984 8.32e-17 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco12g0733 zf-C2H2_6 3.6e-06 CL0361